Analysis of interatomic Contacts of Structural Units in PDB entry:
6WN1

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6WN1 entry

There are 6 chains in PDB entry 6WN1 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASN 170	HIS 464
B	GLU 6	CYS 230
C	TYR 7	GLU 217
F	TYR 7	LYS 117
D	ASN 170	PHE 462
E	VAL 7	VAL 125

There are 26 helices in PDB entry 6WN1. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	196	212	Right-handed alpha
Helix 2	AA2	A	217	240	Right-handed alpha
Helix 3	AA3	A	240	256	Right-handed alpha
Helix 4	AA4	A	256	263	Right-handed alpha
Helix 5	AA5	A	266	289	Right-handed alpha
Helix 6	AA6	A	289	309	Right-handed alpha
Helix 7	AA7	A	318	334	Right-handed alpha
Helix 8	AA8	A	336	363	Right-handed alpha
Helix 9	AA9	A	367	407	Right-handed alpha
Helix 10	AB1	A	415	460	Right-handed alpha
Helix 11	AB2	B	33	37	Right-handed 310
Helix 12	AB3	B	92	96	Right-handed 310
Helix 13	AB4	B	170	172	Right-handed 310
Helix 14	AB5	C	31	35	Right-handed 310
Helix 15	AB6	C	83	87	Right-handed 310
Helix 16	AB7	C	128	134	Right-handed alpha
Helix 17	AB8	C	188	194	Right-handed alpha
Helix 18	AB9	D	197	213	Right-handed alpha
Helix 19	AC1	D	227	240	Right-handed alpha
Helix 20	AC2	D	241	256	Right-handed alpha
Helix 21	AC3	D	256	261	Right-handed alpha
Helix 22	AC4	D	266	288	Right-handed alpha
Helix 23	AC5	D	289	306	Right-handed alpha
Helix 24	AC6	D	339	363	Right-handed alpha
Helix 25	AC7	D	367	406	Right-handed alpha
Helix 26	AC8	D	423	460	Right-handed alpha

There are 21 sheets in PDB entry 6WN1. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	179	181	first strand
Strand 2	A	188	190	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	316	317	first strand
Strand 2	A	413	414	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	8	12	first strand
Strand 2	B	23	30	anti-parallel
Strand 3	B	83	88	anti-parallel
Strand 4	B	73	78	anti-parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	16	17	first strand
Strand 2	B	121	125	parallel
Strand 3	B	97	104	anti-parallel
Strand 4	B	39	44	anti-parallel
Strand 5	B	50	56	anti-parallel
Strand 6	B	63	65	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	16	17	first strand
Strand 2	B	121	125	parallel
Strand 3	B	97	104	anti-parallel
Strand 4	B	114	116	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	134	138	first strand
Strand 2	B	149	159	anti-parallel
Strand 3	B	190	199	anti-parallel
Strand 4	B	177	179	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	134	138	first strand
Strand 2	B	149	159	anti-parallel
Strand 3	B	190	199	anti-parallel
Strand 4	B	183	184	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	164	168	first strand
Strand 2	B	208	214	anti-parallel
Strand 3	B	219	225	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	14	17	first strand
Strand 2	C	108	112	parallel
Strand 3	C	89	96	anti-parallel
Strand 4	C	38	42	anti-parallel
Strand 5	C	49	52	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	14	17	first strand
Strand 2	C	108	112	parallel
Strand 3	C	89	96	anti-parallel
Strand 4	C	101	104	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	23	28	first strand
Strand 2	C	74	79	anti-parallel
Strand 3	C	66	71	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	121	125	first strand
Strand 2	C	138	146	anti-parallel
Strand 3	C	179	186	anti-parallel
Strand 4	C	166	168	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	121	125	first strand
Strand 2	C	138	146	anti-parallel
Strand 3	C	179	186	anti-parallel
Strand 4	C	172	173	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	161	162	first strand
Strand 2	C	151	157	anti-parallel
Strand 3	C	198	204	anti-parallel
Strand 4	C	207	213	anti-parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	14	17	first strand
Strand 2	F	108	112	parallel
Strand 3	F	89	96	anti-parallel
Strand 4	F	37	42	anti-parallel
Strand 5	F	49	52	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	14	17	first strand
Strand 2	F	108	112	parallel
Strand 3	F	89	96	anti-parallel
Strand 4	F	101	104	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	23	27	first strand
Strand 2	F	75	79	anti-parallel
Strand 3	F	66	69	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	180	181	first strand
Strand 2	D	188	189	anti-parallel

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There are 6 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	15	16	first strand
Strand 2	E	121	124	parallel
Strand 3	E	97	104	anti-parallel
Strand 4	E	39	44	anti-parallel
Strand 5	E	50	56	anti-parallel
Strand 6	E	63	65	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	15	16	first strand
Strand 2	E	121	124	parallel
Strand 3	E	97	104	anti-parallel
Strand 4	E	114	116	anti-parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	23	27	first strand
Strand 2	E	83	88	anti-parallel
Strand 3	E	73	78	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6WN1

Analysis of interatomic Contacts of Structural Units in PDB entry:
6WN1