Analysis of interatomic Contacts of Structural Units in PDB entry:
6WN4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6WN4 entry

There are 6 chains in PDB entry 6WN4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 20PRO 239
B
 GLN 23ARG 232
C
 ASP 412SER 422
D
 ASP 412SER 422
H
 LYS 20ARG 240
L
 GLN 23GLU 234
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 6WN4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
47 49Right-handed 310
Helix 2
AA2
A
81 84Right-handed 310
Helix 3
AA3
A
93 95Right-handed 310
Helix 4
AA4
A
106 110Right-handed 310
Helix 5
AA5
A
183 185Right-handed 310
Helix 6
AA6
B
100 104Right-handed 310
Helix 7
AA7
B
142 149Right-handed alpha
Helix 8
AA8
B
204 208Right-handed alpha
Helix 9
AA9
C
416 422Right-handed alpha
Helix 10
AB1
D
416 421Right-handed alpha
Helix 11
AB2
H
47 49Right-handed 310
Helix 12
AB3
H
81 84Right-handed 310
Helix 13
AB4
H
93 95Right-handed 310
Helix 14
AB5
H
106 110Right-handed 310
Helix 15
AB6
H
183 185Right-handed 310
Helix 16
AB7
L
100 104Right-handed 310
Helix 17
AB8
L
142 148Right-handed alpha
Helix 18
AB9
L
204 208Right-handed alpha
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There are 22 sheets in PDB entry 6WN4. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
22 25first strand
Strand 2
A
37 44anti-parallel
Strand 3
A
97 102anti-parallel
Strand 4
A
87 92anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
29 31first strand
Strand 2
A
134 138parallel
Strand 3
A
111 119anti-parallel
Strand 4
A
51 58anti-parallel
Strand 5
A
65 70anti-parallel
Strand 6
A
77 79anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
29 31first strand
Strand 2
A
134 138parallel
Strand 3
A
111 119anti-parallel
Strand 4
A
129 130anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
147 151first strand
Strand 2
A
162 172anti-parallel
Strand 3
A
201 211anti-parallel
Strand 4
A
190 192anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
147 151first strand
Strand 2
A
162 172anti-parallel
Strand 3
A
201 211anti-parallel
Strand 4
A
196 198anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
178 181first strand
Strand 2
A
221 226anti-parallel
Strand 3
A
231 236anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
26 29first strand
Strand 2
B
41 47anti-parallel
Strand 3
B
91 96anti-parallel
Strand 4
B
83 88anti-parallel
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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
32 35first strand
Strand 2
B
123 127parallel
Strand 3
B
105 111anti-parallel
Strand 4
B
55 59anti-parallel
Strand 5
B
66 70anti-parallel
Strand 6
B
74 75anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
32 35first strand
Strand 2
B
123 127parallel
Strand 3
B
105 111anti-parallel
Strand 4
B
118 119anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
135 139first strand
Strand 2
B
150 160anti-parallel
Strand 3
B
194 203anti-parallel
Strand 4
B
180 184anti-parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
174 176first strand
Strand 2
B
166 171anti-parallel
Strand 3
B
212 218anti-parallel
Strand 4
B
226 231anti-parallel
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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
22 25first strand
Strand 2
H
37 44anti-parallel
Strand 3
H
97 102anti-parallel
Strand 4
H
87 92anti-parallel
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There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
29 31first strand
Strand 2
H
134 138parallel
Strand 3
H
111 119anti-parallel
Strand 4
H
51 58anti-parallel
Strand 5
H
65 70anti-parallel
Strand 6
H
77 79anti-parallel
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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
29 31first strand
Strand 2
H
134 138parallel
Strand 3
H
111 119anti-parallel
Strand 4
H
129 130anti-parallel
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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
147 151first strand
Strand 2
H
162 172anti-parallel
Strand 3
H
201 211anti-parallel
Strand 4
H
190 192anti-parallel
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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
147 151first strand
Strand 2
H
162 172anti-parallel
Strand 3
H
201 211anti-parallel
Strand 4
H
196 198anti-parallel
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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
178 181first strand
Strand 2
H
221 226anti-parallel
Strand 3
H
231 236anti-parallel
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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
26 29first strand
Strand 2
L
41 47anti-parallel
Strand 3
L
91 96anti-parallel
Strand 4
L
83 88anti-parallel
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There are 6 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
32 35first strand
Strand 2
L
123 127parallel
Strand 3
L
105 111anti-parallel
Strand 4
L
55 59anti-parallel
Strand 5
L
66 70anti-parallel
Strand 6
L
74 75anti-parallel
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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
32 35first strand
Strand 2
L
123 127parallel
Strand 3
L
105 111anti-parallel
Strand 4
L
118 119anti-parallel
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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
135 139first strand
Strand 2
L
150 160anti-parallel
Strand 3
L
194 203anti-parallel
Strand 4
L
180 184anti-parallel
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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
174 176first strand
Strand 2
L
166 171anti-parallel
Strand 3
L
212 218anti-parallel
Strand 4
L
226 231anti-parallel
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