Analysis of interatomic Contacts of Structural Units in PDB entry:
6WN5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6WN5 entry

There is 1 chain in PDB entry 6WN5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 45LEU 228
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 7 helices in PDB entry 6WN5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
52 59Right-handed alpha
Helix 2
AA2
A
59 68Right-handed alpha
Helix 3
AA3
A
82 92Right-handed alpha
Helix 4
AA4
A
129 133Right-handed 310
Helix 5
AA5
A
164 173Right-handed alpha
Helix 6
AA6
A
183 188Right-handed alpha
Helix 7
AA7
A
215 223Right-handed alpha
Back to top of page

There are 3 sheets in PDB entry 6WN5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
76 80first strand
Strand 2
A
47 51parallel
Strand 3
A
97 100parallel
Strand 4
A
201 210anti-parallel
Strand 5
A
109 123anti-parallel
Strand 6
A
177 182anti-parallel
Strand 7
A
134 135parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
76 80first strand
Strand 2
A
47 51parallel
Strand 3
A
97 100parallel
Strand 4
A
201 210anti-parallel
Strand 5
A
109 123anti-parallel
Strand 6
A
193 194anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
137 138first strand
Strand 2
A
161 162parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il