Analysis of interatomic Contacts of Structural Units in PDB entry:
6WNN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6WNN entry

There are 2 chains in PDB entry 6WNN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 4ASP 448
B
 ASP 4LEU 446
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 6WNN. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
4 13Right-handed alpha
Helix 2
AA2
A
19 26Right-handed alpha
Helix 3
AA3
A
50 55Right-handed alpha
Helix 4
AA4
A
62 74Right-handed alpha
Helix 5
AA5
A
87 100Right-handed alpha
Helix 6
AA6
A
112 132Right-handed alpha
Helix 7
AA7
A
180 184Right-handed 310
Helix 8
AA8
A
188 208Right-handed alpha
Helix 9
AA9
A
222 226Right-handed alpha
Helix 10
AB1
A
233 244Right-handed alpha
Helix 11
AB2
A
264 270Right-handed 310
Helix 12
AB3
A
279 284Right-handed 310
Helix 13
AB4
A
296 301Right-handed alpha
Helix 14
AB5
A
305 309Right-handed 310
Helix 15
AB6
A
321 339Right-handed alpha
Helix 16
AB7
A
339 355Right-handed alpha
Helix 17
AB8
A
355 360Right-handed alpha
Helix 18
AB9
A
389 392Right-handed 310
Helix 19
AC1
A
393 405Right-handed alpha
Helix 20
AC2
A
425 447Right-handed alpha
Helix 21
AC3
B
5 13Right-handed alpha
Helix 22
AC4
B
19 26Right-handed alpha
Helix 23
AC5
B
50 55Right-handed alpha
Helix 24
AC6
B
62 76Right-handed alpha
Helix 25
AC7
B
87 99Right-handed alpha
Helix 26
AC8
B
112 132Right-handed alpha
Helix 27
AC9
B
188 208Right-handed alpha
Helix 28
AD1
B
232 245Right-handed alpha
Helix 29
AD2
B
264 270Right-handed 310
Helix 30
AD3
B
296 303Right-handed alpha
Helix 31
AD4
B
305 309Right-handed 310
Helix 32
AD5
B
321 338Right-handed alpha
Helix 33
AD6
B
339 357Right-handed alpha
Helix 34
AD7
B
358 361Right-handed 310
Helix 35
AD8
B
393 405Right-handed alpha
Helix 36
AD9
B
425 445Right-handed alpha
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There are 8 sheets in PDB entry 6WNN. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
407 408first strand
Strand 2
A
45 48parallel
Strand 3
A
37 40anti-parallel
Strand 4
A
29 34anti-parallel
Strand 5
B
85 86parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
85 86first strand
Strand 2
B
29 32parallel
Strand 3
B
37 40anti-parallel
Strand 4
B
45 47anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
104 110first strand
Strand 2
A
290 295anti-parallel
Strand 3
A
275 278anti-parallel
Strand 4
A
247 251parallel
Strand 5
A
211 217parallel
Strand 6
A
138 142parallel
Strand 7
A
174 176parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
220 221first strand
Strand 2
A
227 228anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
364 370first strand
Strand 2
A
373 378anti-parallel
Strand 3
A
415 418anti-parallel
Strand 4
A
410 412anti-parallel
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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
104 110first strand
Strand 2
B
290 295anti-parallel
Strand 3
B
275 278anti-parallel
Strand 4
B
247 252parallel
Strand 5
B
211 217parallel
Strand 6
B
138 142parallel
Strand 7
B
175 176parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
220 221first strand
Strand 2
B
227 228anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
366 370first strand
Strand 2
B
373 377anti-parallel
Strand 3
B
415 418anti-parallel
Strand 4
B
411 412anti-parallel
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