Analysis of interatomic Contacts of Structural Units in PDB entry:
6WPI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6WPI entry

There are 3 chains in PDB entry 6WPI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 47PRO 634
B
 A 2 C 45
C
 A 14 U 40
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 40 helices in PDB entry 6WPI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
57 74Right-handed alpha
Helix 2
AA2
A
78 93Right-handed alpha
Helix 3
AA3
A
96 102Right-handed alpha
Helix 4
AA4
A
106 117Right-handed alpha
Helix 5
AA5
A
118 129Right-handed alpha
Helix 6
AA6
A
132 138Right-handed alpha
Helix 7
AA7
A
141 162Right-handed alpha
Helix 8
AA8
A
176 190Right-handed alpha
Helix 9
AA9
A
192 198Right-handed alpha
Helix 10
AB1
A
201 214Right-handed alpha
Helix 11
AB2
A
255 274Right-handed alpha
Helix 12
AB3
A
279 283Right-handed 310
Helix 13
AB4
A
284 297Right-handed alpha
Helix 14
AB5
A
299 311Right-handed alpha
Helix 15
AB6
A
312 314Right-handed 310
Helix 16
AB7
A
318 323Right-handed alpha
Helix 17
AB8
A
332 343Right-handed alpha
Helix 18
AB9
A
345 357Right-handed alpha
Helix 19
AC1
A
360 372Right-handed alpha
Helix 20
AC2
A
375 382Right-handed alpha
Helix 21
AC3
A
385 397Right-handed alpha
Helix 22
AC4
A
398 410Right-handed alpha
Helix 23
AC5
A
412 420Right-handed alpha
Helix 24
AC6
A
420 434Right-handed alpha
Helix 25
AC7
A
438 451Right-handed alpha
Helix 26
AC8
A
459 464Right-handed alpha
Helix 27
AC9
A
466 470Right-handed 310
Helix 28
AD1
A
481 496Right-handed alpha
Helix 29
AD2
A
498 512Right-handed alpha
Helix 30
AD3
A
513 523Right-handed alpha
Helix 31
AD4
A
525 534Right-handed alpha
Helix 32
AD5
A
535 539Right-handed 310
Helix 33
AD6
A
540 553Right-handed alpha
Helix 34
AD7
A
554 560Right-handed alpha
Helix 35
AD8
A
563 575Right-handed alpha
Helix 36
AD9
A
578 592Right-handed alpha
Helix 37
AE1
A
592 599Right-handed alpha
Helix 38
AE2
A
599 610Right-handed alpha
Helix 39
AE3
A
610 617Right-handed alpha
Helix 40
AE4
A
617 633Right-handed alpha
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There are no sheets in PDB entry 6WPI
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il