Analysis of interatomic Contacts of Structural Units in PDB entry:
6WPY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6WPY entry

There are 6 chains in PDB entry 6WPY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 29ILE 273
B
 GLY 29ILE 273
C
 GLY 29ILE 273
D
 GLY 29ILE 273
E
 GLY 29ILE 273
F
 GLY 29ILE 273
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 91 helices in PDB entry 6WPY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
59 64Right-handed 310
Helix 2
AA2
A
68 76Right-handed alpha
Helix 3
AA3
A
90 110Right-handed alpha
Helix 4
AA4
A
120 132Right-handed alpha
Helix 5
AA5
A
133 136Right-handed 310
Helix 6
AA6
A
151 158Right-handed alpha
Helix 7
AA7
A
164 170Right-handed alpha
Helix 8
AA8
A
173 178Right-handed alpha
Helix 9
AA9
A
180 192Right-handed alpha
Helix 10
AB1
A
194 200Right-handed 310
Helix 11
AB2
A
215 225Right-handed alpha
Helix 12
AB3
A
236 240Right-handed 310
Helix 13
AB4
A
255 258Right-handed 310
Helix 14
AB5
A
259 268Right-handed alpha
Helix 15
AB6
A
269 271Right-handed 310
Helix 16
AB7
B
59 64Right-handed 310
Helix 17
AB8
B
68 76Right-handed alpha
Helix 18
AB9
B
90 110Right-handed alpha
Helix 19
AC1
B
120 132Right-handed alpha
Helix 20
AC2
B
133 136Right-handed 310
Helix 21
AC3
B
151 158Right-handed alpha
Helix 22
AC4
B
162 170Right-handed alpha
Helix 23
AC5
B
173 178Right-handed alpha
Helix 24
AC6
B
180 192Right-handed alpha
Helix 25
AC7
B
194 200Right-handed 310
Helix 26
AC8
B
215 225Right-handed alpha
Helix 27
AC9
B
236 240Right-handed 310
Helix 28
AD1
B
255 258Right-handed 310
Helix 29
AD2
B
259 268Right-handed alpha
Helix 30
AD3
B
269 271Right-handed 310
Helix 31
AD4
C
59 64Right-handed 310
Helix 32
AD5
C
68 76Right-handed alpha
Helix 33
AD6
C
90 110Right-handed alpha
Helix 34
AD7
C
119 132Right-handed alpha
Helix 35
AD8
C
133 136Right-handed 310
Helix 36
AD9
C
151 161Right-handed alpha
Helix 37
AE1
C
164 170Right-handed alpha
Helix 38
AE2
C
173 178Right-handed alpha
Helix 39
AE3
C
180 193Right-handed alpha
Helix 40
AE4
C
194 200Right-handed 310
Helix 41
AE5
C
215 225Right-handed alpha
Helix 42
AE6
C
236 240Right-handed 310
Helix 43
AE7
C
255 258Right-handed 310
Helix 44
AE8
C
259 268Right-handed alpha
Helix 45
AE9
C
269 271Right-handed 310
Helix 46
AF1
D
59 64Right-handed 310
Helix 47
AF2
D
68 76Right-handed alpha
Helix 48
AF3
D
90 110Right-handed alpha
Helix 49
AF4
D
120 132Right-handed alpha
Helix 50
AF5
D
133 136Right-handed 310
Helix 51
AF6
D
151 159Right-handed alpha
Helix 52
AF7
D
162 164Right-handed 310
Helix 53
AF8
D
165 170Right-handed alpha
Helix 54
AF9
D
173 178Right-handed alpha
Helix 55
AG1
D
180 193Right-handed alpha
Helix 56
AG2
D
194 200Right-handed 310
Helix 57
AG3
D
215 225Right-handed alpha
Helix 58
AG4
D
236 240Right-handed 310
Helix 59
AG5
D
255 258Right-handed 310
Helix 60
AG6
D
259 268Right-handed alpha
Helix 61
AG7
D
269 271Right-handed 310
Helix 62
AG8
E
59 64Right-handed 310
Helix 63
AG9
E
68 76Right-handed alpha
Helix 64
AH1
E
90 110Right-handed alpha
Helix 65
AH2
E
120 132Right-handed alpha
Helix 66
AH3
E
133 136Right-handed 310
Helix 67
AH4
E
151 158Right-handed alpha
Helix 68
AH5
E
165 170Right-handed alpha
Helix 69
AH6
E
173 178Right-handed alpha
Helix 70
AH7
E
180 192Right-handed alpha
Helix 71
AH8
E
194 200Right-handed 310
Helix 72
AH9
E
218 225Right-handed alpha
Helix 73
AI1
E
236 240Right-handed 310
Helix 74
AI2
E
255 258Right-handed 310
Helix 75
AI3
E
259 268Right-handed alpha
Helix 76
AI4
E
269 271Right-handed 310
Helix 77
AI5
F
59 64Right-handed 310
Helix 78
AI6
F
68 76Right-handed alpha
Helix 79
AI7
F
90 110Right-handed alpha
Helix 80
AI8
F
120 132Right-handed alpha
Helix 81
AI9
F
133 136Right-handed 310
Helix 82
AJ1
F
151 161Right-handed alpha
Helix 83
AJ2
F
165 170Right-handed alpha
Helix 84
AJ3
F
173 178Right-handed alpha
Helix 85
AJ4
F
180 193Right-handed alpha
Helix 86
AJ5
F
194 200Right-handed 310
Helix 87
AJ6
F
215 225Right-handed alpha
Helix 88
AJ7
F
236 240Right-handed 310
Helix 89
AJ8
F
255 258Right-handed 310
Helix 90
AJ9
F
259 268Right-handed alpha
Helix 91
AK1
F
269 271Right-handed 310
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There are 6 sheets in PDB entry 6WPY. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
34 36first strand
Strand 2
A
80 83anti-parallel
Strand 3
A
50 53parallel
Strand 4
A
113 118parallel
Strand 5
A
138 144parallel
Strand 6
A
201 205parallel
Strand 7
A
245 246parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
34 36first strand
Strand 2
B
80 83anti-parallel
Strand 3
B
50 53parallel
Strand 4
B
113 118parallel
Strand 5
B
138 144parallel
Strand 6
B
201 205parallel
Strand 7
B
245 246parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
34 37first strand
Strand 2
C
80 83anti-parallel
Strand 3
C
50 53parallel
Strand 4
C
113 118parallel
Strand 5
C
138 144parallel
Strand 6
C
201 205parallel
Strand 7
C
245 246parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
34 36first strand
Strand 2
D
80 83anti-parallel
Strand 3
D
50 53parallel
Strand 4
D
113 118parallel
Strand 5
D
138 144parallel
Strand 6
D
201 205parallel
Strand 7
D
245 246parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
34 36first strand
Strand 2
E
80 83anti-parallel
Strand 3
E
50 53parallel
Strand 4
E
113 118parallel
Strand 5
E
138 144parallel
Strand 6
E
201 205parallel
Strand 7
E
245 246parallel
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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
34 36first strand
Strand 2
F
80 83anti-parallel
Strand 3
F
50 53parallel
Strand 4
F
113 118parallel
Strand 5
F
138 144parallel
Strand 6
F
201 205parallel
Strand 7
F
245 246parallel
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