Analysis of interatomic Contacts of Structural Units in PDB entry:
6WQH

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6WQH entry

There are 7 chains in PDB entry 6WQH (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 244	VAL 780
B	SER 244	VAL 780
C	SER 244	GLN 781
F	SER 244	VAL 780
D	SER 244	VAL 780
E	SER 244	VAL 780
S	UNK 1	UNK 11

There are149 helices in PDB entry 6WQH. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	244	256	Right-handed alpha
Helix 2	AA2	A	259	274	Right-handed alpha
Helix 3	AA3	A	280	296	Right-handed alpha
Helix 4	AA4	A	307	315	Right-handed alpha
Helix 5	AA5	A	322	338	Right-handed alpha
Helix 6	AA6	A	363	372	Right-handed alpha
Helix 7	AA7	A	386	391	Right-handed alpha
Helix 8	AA8	A	403	412	Right-handed alpha
Helix 9	AA9	A	423	427	Right-handed 310
Helix 10	AB1	A	435	440	Right-handed alpha
Helix 11	AB2	A	441	443	Right-handed 310
Helix 12	AB3	A	447	450	Right-handed 310
Helix 13	AB4	A	473	477	Right-handed 310
Helix 14	AB5	A	478	484	Right-handed alpha
Helix 15	AB6	A	494	505	Right-handed alpha
Helix 16	AB7	A	505	513	Right-handed alpha
Helix 17	AB8	A	523	533	Right-handed alpha
Helix 18	AB9	A	539	561	Right-handed alpha
Helix 19	AC1	A	570	572	Right-handed 310
Helix 20	AC2	A	573	579	Right-handed alpha
Helix 21	AC3	A	630	647	Right-handed alpha
Helix 22	AC4	A	656	659	Right-handed 310
Helix 23	AC5	A	680	693	Right-handed alpha
Helix 24	AC6	A	718	728	Right-handed alpha
Helix 25	AC7	A	738	746	Right-handed 310
Helix 26	AC8	A	747	752	Right-handed alpha
Helix 27	AC9	A	762	770	Right-handed alpha
Helix 28	AD1	B	245	256	Right-handed alpha
Helix 29	AD2	B	259	274	Right-handed alpha
Helix 30	AD3	B	282	294	Right-handed alpha
Helix 31	AD4	B	308	316	Right-handed alpha
Helix 32	AD5	B	322	338	Right-handed alpha
Helix 33	AD6	B	364	373	Right-handed alpha
Helix 34	AD7	B	403	412	Right-handed alpha
Helix 35	AD8	B	434	437	Right-handed 310
Helix 36	AD9	B	438	443	Right-handed alpha
Helix 37	AE1	B	447	451	Right-handed 310
Helix 38	AE2	B	478	485	Right-handed alpha
Helix 39	AE3	B	494	505	Right-handed alpha
Helix 40	AE4	B	505	514	Right-handed alpha
Helix 41	AE5	B	524	534	Right-handed alpha
Helix 42	AE6	B	543	561	Right-handed alpha
Helix 43	AE7	B	573	578	Right-handed alpha
Helix 44	AE8	B	630	645	Right-handed alpha
Helix 45	AE9	B	656	660	Right-handed alpha
Helix 46	AF1	B	679	692	Right-handed alpha
Helix 47	AF2	B	718	729	Right-handed alpha
Helix 48	AF3	B	738	746	Right-handed 310
Helix 49	AF4	B	747	753	Right-handed alpha
Helix 50	AF5	B	761	770	Right-handed alpha
Helix 51	AF6	C	245	256	Right-handed alpha
Helix 52	AF7	C	259	272	Right-handed alpha
Helix 53	AF8	C	281	296	Right-handed alpha
Helix 54	AF9	C	307	316	Right-handed alpha
Helix 55	AG1	C	322	338	Right-handed alpha
Helix 56	AG2	C	361	373	Right-handed alpha
Helix 57	AG3	C	403	412	Right-handed alpha
Helix 58	AG4	C	434	443	Right-handed alpha
Helix 59	AG5	C	444	451	Right-handed 310
Helix 60	AG6	C	478	483	Right-handed alpha
Helix 61	AG7	C	494	505	Right-handed alpha
Helix 62	AG8	C	505	512	Right-handed alpha
Helix 63	AG9	C	523	535	Right-handed alpha
Helix 64	AH1	C	540	561	Right-handed alpha
Helix 65	AH2	C	573	579	Right-handed alpha
Helix 66	AH3	C	630	647	Right-handed alpha
Helix 67	AH4	C	656	661	Right-handed alpha
Helix 68	AH5	C	679	693	Right-handed alpha
Helix 69	AH6	C	717	728	Right-handed alpha
Helix 70	AH7	C	738	746	Right-handed 310
Helix 71	AH8	C	747	753	Right-handed alpha
Helix 72	AH9	C	761	770	Right-handed alpha
Helix 73	AI1	F	245	256	Right-handed alpha
Helix 74	AI2	F	259	262	Right-handed 310
Helix 75	AI3	F	263	268	Right-handed alpha
Helix 76	AI4	F	268	273	Right-handed alpha
Helix 77	AI5	F	274	276	Right-handed 310
Helix 78	AI6	F	286	294	Right-handed alpha
Helix 79	AI7	F	307	316	Right-handed alpha
Helix 80	AI8	F	322	334	Right-handed alpha
Helix 81	AI9	F	335	339	Right-handed 310
Helix 82	AJ1	F	362	371	Right-handed alpha
Helix 83	AJ2	F	403	412	Right-handed alpha
Helix 84	AJ3	F	435	444	Right-handed alpha
Helix 85	AJ4	F	478	483	Right-handed alpha
Helix 86	AJ5	F	496	505	Right-handed alpha
Helix 87	AJ6	F	505	512	Right-handed alpha
Helix 88	AJ7	F	513	515	Right-handed 310
Helix 89	AJ8	F	523	533	Right-handed alpha
Helix 90	AJ9	F	540	561	Right-handed alpha
Helix 91	AK1	F	574	579	Right-handed alpha
Helix 92	AK2	F	630	646	Right-handed alpha
Helix 93	AK3	F	656	660	Right-handed alpha
Helix 94	AK4	F	676	678	Right-handed 310
Helix 95	AK5	F	679	693	Right-handed alpha
Helix 96	AK6	F	717	728	Right-handed alpha
Helix 97	AK7	F	738	746	Right-handed 310
Helix 98	AK8	F	747	754	Right-handed alpha
Helix 99	AK9	F	761	770	Right-handed alpha
Helix 100	AL1	D	245	254	Right-handed alpha
Helix 101	AL2	D	259	274	Right-handed alpha
Helix 102	AL3	D	282	294	Right-handed alpha
Helix 103	AL4	D	307	318	Right-handed alpha
Helix 104	AL5	D	322	337	Right-handed alpha
Helix 105	AL6	D	361	373	Right-handed alpha
Helix 106	AL7	D	386	390	Right-handed 310
Helix 107	AL8	D	403	412	Right-handed alpha
Helix 108	AL9	D	435	437	Right-handed 310
Helix 109	AM1	D	438	443	Right-handed alpha
Helix 110	AM2	D	446	451	Right-handed 310
Helix 111	AM3	D	478	484	Right-handed alpha
Helix 112	AM4	D	494	505	Right-handed alpha
Helix 113	AM5	D	506	515	Right-handed alpha
Helix 114	AM6	D	523	535	Right-handed alpha
Helix 115	AM7	D	540	560	Right-handed alpha
Helix 116	AM8	D	570	572	Right-handed 310
Helix 117	AM9	D	573	579	Right-handed alpha
Helix 118	AN1	D	630	647	Right-handed alpha
Helix 119	AN2	D	654	659	Right-handed 310
Helix 120	AN3	D	679	693	Right-handed alpha
Helix 121	AN4	D	718	728	Right-handed alpha
Helix 122	AN5	D	738	746	Right-handed 310
Helix 123	AN6	D	747	754	Right-handed alpha
Helix 124	AN7	D	761	770	Right-handed alpha
Helix 125	AN8	E	245	250	Right-handed 310
Helix 126	AN9	E	262	267	Right-handed alpha
Helix 127	AO1	E	272	276	Right-handed 310
Helix 128	AO2	E	285	294	Right-handed alpha
Helix 129	AO3	E	307	317	Right-handed alpha
Helix 130	AO4	E	326	338	Right-handed alpha
Helix 131	AO5	E	362	370	Right-handed alpha
Helix 132	AO6	E	403	412	Right-handed alpha
Helix 133	AO7	E	423	427	Right-handed 310
Helix 134	AO8	E	434	444	Right-handed alpha
Helix 135	AO9	E	447	451	Right-handed 310
Helix 136	AP1	E	478	482	Right-handed 310
Helix 137	AP2	E	494	505	Right-handed alpha
Helix 138	AP3	E	506	515	Right-handed alpha
Helix 139	AP4	E	523	533	Right-handed alpha
Helix 140	AP5	E	540	544	Right-handed 310
Helix 141	AP6	E	547	561	Right-handed alpha
Helix 142	AP7	E	570	572	Right-handed 310
Helix 143	AP8	E	573	578	Right-handed alpha
Helix 144	AP9	E	630	646	Right-handed alpha
Helix 145	AQ1	E	679	693	Right-handed alpha
Helix 146	AQ2	E	717	728	Right-handed alpha
Helix 147	AQ3	E	738	746	Right-handed 310
Helix 148	AQ4	E	747	754	Right-handed alpha
Helix 149	AQ5	E	761	770	Right-handed alpha

There are 30 sheets in PDB entry 6WQH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	468	471	first strand
Strand 2	A	351	354	parallel
Strand 3	A	486	489	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	376	380	first strand
Strand 2	A	418	422	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	451	452	first strand
Strand 2	A	459	460	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	520	522	first strand
Strand 2	A	567	569	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	593	594	first strand
Strand 2	A	695	696	anti-parallel

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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	623	625	first strand
Strand 2	A	661	666	parallel
Strand 3	A	606	618	anti-parallel
Strand 4	A	596	603	anti-parallel
Strand 5	A	700	702	parallel
Strand 6	A	732	736	parallel
Strand 7	A	755	759	parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	376	380	first strand
Strand 2	B	418	422	parallel
Strand 3	B	466	470	parallel
Strand 4	B	351	354	parallel
Strand 5	B	486	489	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	520	522	first strand
Strand 2	B	567	569	parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	606	611	first strand
Strand 2	B	598	603	anti-parallel
Strand 3	B	700	702	parallel
Strand 4	B	732	736	parallel
Strand 5	B	755	759	parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	613	618	first strand
Strand 2	B	661	666	anti-parallel
Strand 3	B	623	625	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	705	706	first strand
Strand 2	B	712	713	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	420	421	first strand
Strand 2	C	468	471	parallel
Strand 3	C	351	354	parallel
Strand 4	C	486	489	parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	521	522	first strand
Strand 2	C	568	569	parallel

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There are 7 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	622	626	first strand
Strand 2	C	662	666	parallel
Strand 3	C	606	617	anti-parallel
Strand 4	C	596	603	anti-parallel
Strand 5	C	700	702	parallel
Strand 6	C	732	736	parallel
Strand 7	C	755	759	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	705	706	first strand
Strand 2	C	712	713	anti-parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	378	379	first strand
Strand 2	F	418	421	parallel
Strand 3	F	466	471	parallel
Strand 4	F	350	354	parallel
Strand 5	F	485	489	parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	520	522	first strand
Strand 2	F	567	569	parallel

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There are 7 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	623	626	first strand
Strand 2	F	661	666	parallel
Strand 3	F	606	618	anti-parallel
Strand 4	F	596	603	anti-parallel
Strand 5	F	701	702	parallel
Strand 6	F	732	736	parallel
Strand 7	F	755	759	parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	705	706	first strand
Strand 2	F	712	713	anti-parallel

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There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	376	380	first strand
Strand 2	D	418	422	parallel
Strand 3	D	467	471	parallel
Strand 4	D	351	354	parallel
Strand 5	D	486	489	parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	520	522	first strand
Strand 2	D	567	569	parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	593	594	first strand
Strand 2	D	695	696	anti-parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	617	618	first strand
Strand 2	D	661	666	anti-parallel
Strand 3	D	623	626	parallel

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There are 7 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	617	618	first strand
Strand 2	D	661	666	anti-parallel
Strand 3	D	608	614	anti-parallel
Strand 4	D	596	601	anti-parallel
Strand 5	D	700	702	parallel
Strand 6	D	732	736	parallel
Strand 7	D	755	759	parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	705	706	first strand
Strand 2	D	712	713	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	419	420	first strand
Strand 2	E	467	468	parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	520	522	first strand
Strand 2	E	567	569	parallel

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There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	596	603	first strand
Strand 2	E	606	618	anti-parallel
Strand 3	E	661	666	anti-parallel
Strand 4	E	623	625	parallel

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There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	700	702	first strand
Strand 2	E	732	736	parallel
Strand 3	E	755	759	parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	705	706	first strand
Strand 2	E	712	713	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6WQH

Analysis of interatomic Contacts of Structural Units in PDB entry:
6WQH