Analysis of interatomic Contacts of Structural Units in PDB entry:
6WQI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6WQI entry

There are 2 chains in PDB entry 6WQI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LYS 547
B
 MET 1LYS 547
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 49 helices in PDB entry 6WQI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
19 39Right-handed alpha
Helix 2
AA2
A
53 64Right-handed alpha
Helix 3
AA3
A
66 85Right-handed alpha
Helix 4
AA4
A
97 114Right-handed alpha
Helix 5
AA5
A
135 137Right-handed 310
Helix 6
AA6
A
164 168Right-handed 310
Helix 7
AA7
A
192 194Right-handed 310
Helix 8
AA8
A
195 205Right-handed alpha
Helix 9
AA9
A
209 222Right-handed alpha
Helix 10
AB1
A
251 272Right-handed alpha
Helix 11
AB2
A
275 279Right-handed 310
Helix 12
AB3
A
295 301Right-handed alpha
Helix 13
AB4
A
301 310Right-handed alpha
Helix 14
AB5
A
340 347Right-handed alpha
Helix 15
AB6
A
350 361Right-handed alpha
Helix 16
AB7
A
372 384Right-handed alpha
Helix 17
AB8
A
387 404Right-handed alpha
Helix 18
AB9
A
413 423Right-handed alpha
Helix 19
AC1
A
423 433Right-handed alpha
Helix 20
AC2
A
435 458Right-handed alpha
Helix 21
AC3
A
458 465Right-handed alpha
Helix 22
AC4
A
468 491Right-handed alpha
Helix 23
AC5
A
494 505Right-handed alpha
Helix 24
AC6
A
511 516Right-handed 310
Helix 25
AC7
A
535 546Right-handed alpha
Helix 26
AC8
B
19 39Right-handed alpha
Helix 27
AC9
B
53 63Right-handed alpha
Helix 28
AD1
B
66 85Right-handed alpha
Helix 29
AD2
B
97 114Right-handed alpha
Helix 30
AD3
B
135 137Right-handed 310
Helix 31
AD4
B
164 168Right-handed 310
Helix 32
AD5
B
192 194Right-handed 310
Helix 33
AD6
B
195 203Right-handed alpha
Helix 34
AD7
B
209 222Right-handed alpha
Helix 35
AD8
B
251 272Right-handed alpha
Helix 36
AD9
B
274 280Right-handed alpha
Helix 37
AE1
B
295 301Right-handed alpha
Helix 38
AE2
B
301 310Right-handed alpha
Helix 39
AE3
B
340 348Right-handed alpha
Helix 40
AE4
B
350 361Right-handed alpha
Helix 41
AE5
B
372 385Right-handed alpha
Helix 42
AE6
B
387 403Right-handed alpha
Helix 43
AE7
B
413 433Right-handed alpha
Helix 44
AE8
B
435 458Right-handed alpha
Helix 45
AE9
B
458 463Right-handed alpha
Helix 46
AF1
B
468 490Right-handed alpha
Helix 47
AF2
B
494 505Right-handed alpha
Helix 48
AF3
B
511 516Right-handed 310
Helix 49
AF4
B
535 547Right-handed alpha
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There are 10 sheets in PDB entry 6WQI. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
91 94first strand
Strand 2
A
42 49parallel
Strand 3
A
4 9parallel
Strand 4
A
286 292parallel
Strand 5
A
317 321parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
132 133first strand
Strand 2
A
117 127anti-parallel
Strand 3
A
181 190anti-parallel
Strand 4
A
229 230anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
151 152first strand
Strand 2
A
139 142anti-parallel
Strand 3
A
169 173anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
232 234first strand
Strand 2
A
248 250anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
329 330first strand
Strand 2
A
324 326anti-parallel
Strand 3
A
369 371parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
91 94first strand
Strand 2
B
43 49parallel
Strand 3
B
5 9parallel
Strand 4
B
286 292parallel
Strand 5
B
317 321parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
132 133first strand
Strand 2
B
117 127anti-parallel
Strand 3
B
181 190anti-parallel
Strand 4
B
229 230anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
151 152first strand
Strand 2
B
139 142anti-parallel
Strand 3
B
169 173anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
232 234first strand
Strand 2
B
248 250anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
324 326first strand
Strand 2
B
369 371parallel
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