Analysis of interatomic Contacts of Structural Units in PDB entry:
6WQM

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6WQM entry

There are 5 chains in PDB entry 6WQM (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASP 3	ASP 282
B	ASP 3	ARG 281
C	THR 2	ARG 281
D	THR 2	ASP 282
E	THR 2	VAL 211

There are 48 helices in PDB entry 6WQM. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	3	17	Right-handed alpha
Helix 2	AA2	A	18	21	Right-handed 310
Helix 3	AA3	A	26	42	Right-handed alpha
Helix 4	AA4	A	59	73	Right-handed alpha
Helix 5	AA5	A	81	85	Right-handed 310
Helix 6	AA6	A	99	107	Right-handed alpha
Helix 7	AA7	A	267	274	Right-handed alpha
Helix 8	AA8	A	275	282	Right-handed alpha
Helix 9	AA9	B	4	17	Right-handed alpha
Helix 10	AB1	B	18	21	Right-handed 310
Helix 11	AB2	B	26	42	Right-handed alpha
Helix 12	AB3	B	59	73	Right-handed alpha
Helix 13	AB4	B	81	85	Right-handed 310
Helix 14	AB5	B	99	107	Right-handed alpha
Helix 15	AB6	B	267	274	Right-handed alpha
Helix 16	AB7	B	275	281	Right-handed alpha
Helix 17	AB8	C	3	17	Right-handed alpha
Helix 18	AB9	C	18	21	Right-handed 310
Helix 19	AC1	C	26	42	Right-handed alpha
Helix 20	AC2	C	59	73	Right-handed alpha
Helix 21	AC3	C	81	84	Right-handed 310
Helix 22	AC4	C	99	107	Right-handed alpha
Helix 23	AC5	C	267	274	Right-handed alpha
Helix 24	AC6	C	275	281	Right-handed alpha
Helix 25	AC7	D	3	17	Right-handed alpha
Helix 26	AC8	D	18	21	Right-handed 310
Helix 27	AC9	D	26	42	Right-handed alpha
Helix 28	AD1	D	59	73	Right-handed alpha
Helix 29	AD2	D	81	84	Right-handed 310
Helix 30	AD3	D	99	107	Right-handed alpha
Helix 31	AD4	D	267	274	Right-handed alpha
Helix 32	AD5	D	275	281	Right-handed alpha
Helix 33	AD6	E	3	17	Right-handed alpha
Helix 34	AD7	E	18	21	Right-handed 310
Helix 35	AD8	E	26	42	Right-handed alpha
Helix 36	AD9	E	59	73	Right-handed alpha
Helix 37	AE1	E	81	84	Right-handed 310
Helix 38	AE2	E	99	107	Right-handed alpha
Helix 39	AE3	E	267	274	Right-handed alpha
Helix 40	AE4	E	275	282	Right-handed alpha
Helix 41	AE5	F	4	17	Right-handed alpha
Helix 42	AE6	F	18	21	Right-handed 310
Helix 43	AE7	F	26	42	Right-handed alpha
Helix 44	AE8	F	59	73	Right-handed alpha
Helix 45	AE9	F	81	85	Right-handed 310
Helix 46	AF1	F	99	107	Right-handed alpha
Helix 47	AF2	F	267	274	Right-handed alpha
Helix 48	AF3	F	275	282	Right-handed alpha

There are 40 sheets in PDB entry 6WQM. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	48	50	first strand
Strand 2	A	56	58	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	76	78	first strand
Strand 2	A	87	89	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	109	110	first strand
Strand 2	A	127	128	parallel
Strand 3	A	144	145	parallel
Strand 4	A	162	163	parallel
Strand 5	A	188	189	parallel
Strand 6	A	206	207	parallel
Strand 7	A	236	243	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	256	265	first strand
Strand 2	A	218	221	parallel
Strand 3	A	227	229	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	236	243	first strand
Strand 2	B	206	207	parallel
Strand 3	B	188	189	parallel
Strand 4	B	162	163	parallel
Strand 5	B	144	145	parallel
Strand 6	B	127	128	parallel
Strand 7	B	109	110	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	256	265	first strand
Strand 2	B	218	221	parallel
Strand 3	B	227	229	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	236	243	first strand
Strand 2	C	206	207	parallel
Strand 3	C	188	189	parallel
Strand 4	C	162	163	parallel
Strand 5	C	144	145	parallel
Strand 6	C	127	128	parallel
Strand 7	C	109	110	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	227	229	first strand
Strand 2	C	218	221	anti-parallel
Strand 3	C	256	265	parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	236	243	first strand
Strand 2	A	256	265	anti-parallel
Strand 3	B	236	243	anti-parallel
Strand 4	B	256	265	anti-parallel
Strand 5	C	236	243	anti-parallel
Strand 6	C	256	265	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	256	265	first strand
Strand 2	A	236	243	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	114	116	first strand
Strand 2	A	131	133	parallel
Strand 3	A	149	151	parallel
Strand 4	A	168	169	parallel
Strand 5	A	194	195	parallel
Strand 6	A	212	213	parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	121	122	first strand
Strand 2	A	138	139	parallel
Strand 3	A	156	157	parallel
Strand 4	A	182	183	parallel
Strand 5	A	200	201	parallel
Strand 6	A	231	232	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	48	50	first strand
Strand 2	B	56	58	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	76	78	first strand
Strand 2	B	87	89	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	114	116	first strand
Strand 2	B	131	133	parallel
Strand 3	B	149	151	parallel
Strand 4	B	168	169	parallel
Strand 5	B	194	195	parallel
Strand 6	B	212	213	parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	121	122	first strand
Strand 2	B	138	139	parallel
Strand 3	B	156	157	parallel
Strand 4	B	182	183	parallel
Strand 5	B	200	201	parallel
Strand 6	B	231	232	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	48	50	first strand
Strand 2	C	56	58	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	76	79	first strand
Strand 2	C	86	89	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	114	116	first strand
Strand 2	C	131	133	parallel
Strand 3	C	149	151	parallel
Strand 4	C	168	169	parallel
Strand 5	C	194	195	parallel
Strand 6	C	212	213	parallel

Back to list of sheets
Back to top of page

There are 6 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	121	122	first strand
Strand 2	C	138	139	parallel
Strand 3	C	156	157	parallel
Strand 4	C	182	183	parallel
Strand 5	C	200	201	parallel
Strand 6	C	231	232	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	48	50	first strand
Strand 2	D	56	58	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	76	79	first strand
Strand 2	D	86	89	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	109	110	first strand
Strand 2	D	127	128	parallel
Strand 3	D	144	145	parallel
Strand 4	D	162	163	parallel
Strand 5	D	188	189	parallel
Strand 6	D	206	207	parallel
Strand 7	D	236	243	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	256	265	first strand
Strand 2	D	218	221	parallel
Strand 3	D	227	229	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	236	243	first strand
Strand 2	F	206	207	parallel
Strand 3	F	188	189	parallel
Strand 4	F	162	163	parallel
Strand 5	F	144	145	parallel
Strand 6	F	127	128	parallel
Strand 7	F	109	110	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	256	265	first strand
Strand 2	F	218	221	parallel
Strand 3	F	227	229	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	236	243	first strand
Strand 2	E	206	207	parallel
Strand 3	E	188	189	parallel
Strand 4	E	162	163	parallel
Strand 5	E	144	145	parallel
Strand 6	E	127	128	parallel
Strand 7	E	109	110	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	227	229	first strand
Strand 2	E	218	221	anti-parallel
Strand 3	E	256	265	parallel

Back to list of sheets
Back to top of page

There are 6 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	236	243	first strand
Strand 2	D	256	265	anti-parallel
Strand 3	F	236	243	anti-parallel
Strand 4	F	256	265	anti-parallel
Strand 5	E	236	243	anti-parallel
Strand 6	E	256	265	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	256	265	first strand
Strand 2	D	236	243	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	115	116	first strand
Strand 2	D	131	133	parallel
Strand 3	D	149	151	parallel
Strand 4	D	168	169	parallel
Strand 5	D	194	195	parallel
Strand 6	D	212	213	parallel

Back to list of sheets
Back to top of page

There are 6 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	121	122	first strand
Strand 2	D	138	139	parallel
Strand 3	D	156	157	parallel
Strand 4	D	182	183	parallel
Strand 5	D	200	201	parallel
Strand 6	D	231	232	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	48	50	first strand
Strand 2	E	56	58	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	76	79	first strand
Strand 2	E	86	89	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	114	116	first strand
Strand 2	E	131	133	parallel
Strand 3	E	149	151	parallel
Strand 4	E	168	169	parallel
Strand 5	E	194	195	parallel
Strand 6	E	212	213	parallel

Back to list of sheets
Back to top of page

There are 6 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	121	122	first strand
Strand 2	E	138	139	parallel
Strand 3	E	156	157	parallel
Strand 4	E	182	183	parallel
Strand 5	E	200	201	parallel
Strand 6	E	231	232	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	48	50	first strand
Strand 2	F	56	58	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	76	78	first strand
Strand 2	F	87	89	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	114	116	first strand
Strand 2	F	131	133	parallel
Strand 3	F	150	151	parallel
Strand 4	F	168	169	parallel
Strand 5	F	194	195	parallel
Strand 6	F	212	213	parallel

Back to list of sheets
Back to top of page

There are 6 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	121	122	first strand
Strand 2	F	138	139	parallel
Strand 3	F	156	157	parallel
Strand 4	F	182	183	parallel
Strand 5	F	200	201	parallel
Strand 6	F	231	232	parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6WQM

Analysis of interatomic Contacts of Structural Units in PDB entry:
6WQM