Analysis of interatomic Contacts of Structural Units in PDB entry:
6WQV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6WQV entry

There are 2 chains in PDB entry 6WQV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 7LYS 354
B
 THR 9ASN 295
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 64 helices in PDB entry 6WQV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
15 23Right-handed alpha
Helix 2
AA2
A
45 51Right-handed alpha
Helix 3
AA3
A
59 69Right-handed alpha
Helix 4
AA4
A
80 84Right-handed 310
Helix 5
AA5
A
93 109Right-handed alpha
Helix 6
AA6
A
128 150Right-handed alpha
Helix 7
AA7
A
178 198Right-handed alpha
Helix 8
AA8
A
199 205Right-handed 310
Helix 9
AA9
A
213 216Right-handed 310
Helix 10
AB1
A
218 224Right-handed alpha
Helix 11
AB2
A
245 250Right-handed alpha
Helix 12
AB3
A
259 261Right-handed 310
Helix 13
AB4
A
262 277Right-handed alpha
Helix 14
AB5
A
278 281Right-handed 310
Helix 15
AB6
A
296 314Right-handed alpha
Helix 16
AB7
A
345 354Right-handed alpha
Helix 17
AB8
B
15 23Right-handed alpha
Helix 18
AB9
B
45 51Right-handed alpha
Helix 19
AC1
B
59 69Right-handed alpha
Helix 20
AC2
B
80 84Right-handed 310
Helix 21
AC3
B
93 109Right-handed alpha
Helix 22
AC4
B
131 150Right-handed alpha
Helix 23
AC5
B
178 199Right-handed alpha
Helix 24
AC6
B
200 205Right-handed 310
Helix 25
AC7
B
213 216Right-handed 310
Helix 26
AC8
B
218 224Right-handed alpha
Helix 27
AC9
B
245 250Right-handed alpha
Helix 28
AD1
B
259 261Right-handed 310
Helix 29
AD2
B
262 277Right-handed alpha
Helix 30
AD3
B
278 281Right-handed 310
Helix 31
AD4
B
296 314Right-handed alpha
Helix 32
AD5
B
345 354Right-handed alpha
Helix 33
AD6
C
15 23Right-handed alpha
Helix 34
AD7
C
45 51Right-handed alpha
Helix 35
AD8
C
59 69Right-handed alpha
Helix 36
AD9
C
80 84Right-handed 310
Helix 37
AE1
C
93 109Right-handed alpha
Helix 38
AE2
C
128 150Right-handed alpha
Helix 39
AE3
C
178 199Right-handed alpha
Helix 40
AE4
C
200 205Right-handed 310
Helix 41
AE5
C
213 216Right-handed 310
Helix 42
AE6
C
218 224Right-handed alpha
Helix 43
AE7
C
245 250Right-handed alpha
Helix 44
AE8
C
259 261Right-handed 310
Helix 45
AE9
C
262 277Right-handed alpha
Helix 46
AF1
C
278 281Right-handed 310
Helix 47
AF2
C
296 314Right-handed alpha
Helix 48
AF3
C
345 354Right-handed alpha
Helix 49
AF4
D
15 23Right-handed alpha
Helix 50
AF5
D
45 51Right-handed alpha
Helix 51
AF6
D
59 69Right-handed alpha
Helix 52
AF7
D
80 84Right-handed 310
Helix 53
AF8
D
93 109Right-handed alpha
Helix 54
AF9
D
128 150Right-handed alpha
Helix 55
AG1
D
178 199Right-handed alpha
Helix 56
AG2
D
200 205Right-handed 310
Helix 57
AG3
D
213 216Right-handed 310
Helix 58
AG4
D
218 225Right-handed alpha
Helix 59
AG5
D
245 250Right-handed alpha
Helix 60
AG6
D
259 261Right-handed 310
Helix 61
AG7
D
262 277Right-handed alpha
Helix 62
AG8
D
278 281Right-handed 310
Helix 63
AG9
D
296 314Right-handed alpha
Helix 64
AH1
D
345 354Right-handed alpha
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There are 4 sheets in PDB entry 6WQV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
26 29first strand
Strand 2
A
73 76parallel
Strand 3
A
113 117parallel
Strand 4
A
157 160parallel
Strand 5
A
208 211parallel
Strand 6
A
236 241parallel
Strand 7
A
284 289parallel
Strand 8
A
318 322parallel
Strand 9
A
26 29parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
26 29first strand
Strand 2
B
73 76parallel
Strand 3
B
113 117parallel
Strand 4
B
157 160parallel
Strand 5
B
208 211parallel
Strand 6
B
236 241parallel
Strand 7
B
284 289parallel
Strand 8
B
318 322parallel
Strand 9
B
26 29parallel
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There are 9 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
26 29first strand
Strand 2
C
73 76parallel
Strand 3
C
113 117parallel
Strand 4
C
157 160parallel
Strand 5
C
208 211parallel
Strand 6
C
236 241parallel
Strand 7
C
284 289parallel
Strand 8
C
318 322parallel
Strand 9
C
26 29parallel
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There are 9 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
26 29first strand
Strand 2
D
73 76parallel
Strand 3
D
113 117parallel
Strand 4
D
157 160parallel
Strand 5
D
208 211parallel
Strand 6
D
236 241parallel
Strand 7
D
284 289parallel
Strand 8
D
318 322parallel
Strand 9
D
26 29parallel
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