Analysis of interatomic Contacts of Structural Units in PDB entry:
6WQW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6WQW entry

There is 1 chain in PDB entry 6WQW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 4ALA 330
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 6WQW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
5 10Right-handed alpha
Helix 2
AA2
A
23 28Right-handed alpha
Helix 3
AA3
A
28 36Right-handed alpha
Helix 4
AA4
A
46 51Right-handed alpha
Helix 5
AA5
A
59 72Right-handed alpha
Helix 6
AA6
A
88 93Right-handed 310
Helix 7
AA7
A
102 120Right-handed alpha
Helix 8
AA8
A
153 167Right-handed alpha
Helix 9
AA9
A
181 198Right-handed alpha
Helix 10
AB1
A
217 230Right-handed alpha
Helix 11
AB2
A
258 279Right-handed alpha
Helix 12
AB3
A
296 300Right-handed 310
Helix 13
AB4
A
320 330Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 6WQW.

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
210 212first strand
Strand 2
A
234 243parallel
Strand 3
A
283 288parallel
Strand 4
A
15 20parallel
Strand 5
A
38 41parallel
Strand 6
A
75 83parallel
Strand 7
A
124 131parallel
Strand 8
A
171 176parallel
Strand 9
A
204 207parallel
Strand 10
A
234 243parallel
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