Analysis of interatomic Contacts of Structural Units in PDB entry:
6WQY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6WQY entry

There is 1 chain in PDB entry 6WQY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 7VAL 385
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 6WQY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
23 32Right-handed alpha
Helix 2
AA2
A
60 71Right-handed alpha
Helix 3
AA3
A
94 111Right-handed alpha
Helix 4
AA4
A
120 127Right-handed 310
Helix 5
AA5
A
131 136Right-handed alpha
Helix 6
AA6
A
138 160Right-handed alpha
Helix 7
AA7
A
183 187Right-handed 310
Helix 8
AA8
A
190 210Right-handed alpha
Helix 9
AA9
A
211 216Right-handed 310
Helix 10
AB1
A
224 226Right-handed 310
Helix 11
AB2
A
227 235Right-handed alpha
Helix 12
AB3
A
255 260Right-handed alpha
Helix 13
AB4
A
274 278Right-handed 310
Helix 14
AB5
A
283 298Right-handed alpha
Helix 15
AB6
A
299 302Right-handed 310
Helix 16
AB7
A
317 338Right-handed alpha
Helix 17
AB8
A
370 384Right-handed alpha
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There are 2 sheets in PDB entry 6WQY. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
34 37first strand
Strand 2
A
74 77parallel
Strand 3
A
114 118parallel
Strand 4
A
167 170parallel
Strand 5
A
219 222parallel
Strand 6
A
246 251parallel
Strand 7
A
305 310parallel
Strand 8
A
342 346parallel
Strand 9
A
34 37parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
44 45first strand
Strand 2
A
48 49anti-parallel
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