Analysis of interatomic Contacts of Structural Units in PDB entry:
6WR4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6WR4 entry

There are 3 chains in PDB entry 6WR4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 36ALA 522
B
 PRO 36ALA 522
C
 PRO 36ALA 522
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 75 helices in PDB entry 6WR4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
42 56Right-handed alpha
Helix 2
AA2
A
58 86Right-handed alpha
Helix 3
AA3
A
88 94Right-handed alpha
Helix 4
AA4
A
111 115Right-handed 310
Helix 5
AA5
A
118 123Right-handed alpha
Helix 6
AA6
A
129 167Right-handed alpha
Helix 7
AA7
A
179 190Right-handed alpha
Helix 8
AA8
A
208 213Right-handed alpha
Helix 9
AA9
A
215 225Right-handed alpha
Helix 10
AB1
A
244 256Right-handed alpha
Helix 11
AB2
A
271 275Right-handed 310
Helix 12
AB3
A
279 300Right-handed alpha
Helix 13
AB4
A
300 323Right-handed alpha
Helix 14
AB5
A
333 340Right-handed alpha
Helix 15
AB6
A
346 355Right-handed alpha
Helix 16
AB7
A
357 365Right-handed alpha
Helix 17
AB8
A
366 369Right-handed 310
Helix 18
AB9
A
370 399Right-handed alpha
Helix 19
AC1
A
406 425Right-handed alpha
Helix 20
AC2
A
437 445Right-handed alpha
Helix 21
AC3
A
464 469Right-handed alpha
Helix 22
AC4
A
471 481Right-handed alpha
Helix 23
AC5
A
481 492Right-handed alpha
Helix 24
AC6
A
494 496Right-handed 310
Helix 25
AC7
A
497 508Right-handed alpha
Helix 26
AC8
B
42 56Right-handed alpha
Helix 27
AC9
B
58 86Right-handed alpha
Helix 28
AD1
B
88 94Right-handed alpha
Helix 29
AD2
B
111 115Right-handed 310
Helix 30
AD3
B
118 123Right-handed alpha
Helix 31
AD4
B
129 167Right-handed alpha
Helix 32
AD5
B
179 190Right-handed alpha
Helix 33
AD6
B
208 213Right-handed alpha
Helix 34
AD7
B
215 225Right-handed alpha
Helix 35
AD8
B
244 256Right-handed alpha
Helix 36
AD9
B
271 275Right-handed 310
Helix 37
AE1
B
279 300Right-handed alpha
Helix 38
AE2
B
300 323Right-handed alpha
Helix 39
AE3
B
333 340Right-handed alpha
Helix 40
AE4
B
346 355Right-handed alpha
Helix 41
AE5
B
357 365Right-handed alpha
Helix 42
AE6
B
366 369Right-handed 310
Helix 43
AE7
B
370 399Right-handed alpha
Helix 44
AE8
B
406 425Right-handed alpha
Helix 45
AE9
B
437 445Right-handed alpha
Helix 46
AF1
B
464 469Right-handed alpha
Helix 47
AF2
B
471 481Right-handed alpha
Helix 48
AF3
B
481 492Right-handed alpha
Helix 49
AF4
B
494 496Right-handed 310
Helix 50
AF5
B
497 508Right-handed alpha
Helix 51
AF6
C
42 56Right-handed alpha
Helix 52
AF7
C
58 86Right-handed alpha
Helix 53
AF8
C
88 94Right-handed alpha
Helix 54
AF9
C
111 115Right-handed 310
Helix 55
AG1
C
118 123Right-handed alpha
Helix 56
AG2
C
129 167Right-handed alpha
Helix 57
AG3
C
179 190Right-handed alpha
Helix 58
AG4
C
208 213Right-handed alpha
Helix 59
AG5
C
215 225Right-handed alpha
Helix 60
AG6
C
244 256Right-handed alpha
Helix 61
AG7
C
271 275Right-handed 310
Helix 62
AG8
C
279 300Right-handed alpha
Helix 63
AG9
C
300 323Right-handed alpha
Helix 64
AH1
C
333 340Right-handed alpha
Helix 65
AH2
C
346 355Right-handed alpha
Helix 66
AH3
C
357 365Right-handed alpha
Helix 67
AH4
C
366 369Right-handed 310
Helix 68
AH5
C
370 399Right-handed alpha
Helix 69
AH6
C
406 425Right-handed alpha
Helix 70
AH7
C
437 445Right-handed alpha
Helix 71
AH8
C
464 469Right-handed alpha
Helix 72
AH9
C
471 481Right-handed alpha
Helix 73
AI1
C
481 492Right-handed alpha
Helix 74
AI2
C
494 496Right-handed 310
Helix 75
AI3
C
497 508Right-handed alpha
Back to top of page

There are 6 sheets in PDB entry 6WR4. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
231 234first strand
Strand 2
A
238 241anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
510 512first strand
Strand 2
A
516 518anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
231 234first strand
Strand 2
B
238 241anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
510 512first strand
Strand 2
B
516 518anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
231 234first strand
Strand 2
C
238 241anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
510 512first strand
Strand 2
C
516 518anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il