Analysis of interatomic Contacts of Structural Units in PDB entry:
6WRF

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6WRF entry

There are 14 chains in PDB entry 6WRF (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
B	ALA 63	GLY 414
C	SER 62	GLY 414
D	SER 62	GLY 414
E	SER 62	GLY 414
F	LEU 64	GLY 414
H	LEU 2	ASN 193
I	LEU 2	ASN 193
J	LEU 2	ASN 193
K	LEU 2	ASN 193
L	LEU 2	ASN 193
M	LEU 2	PHE 198
N	LEU 2	ARG 192
S	GLU 268	ALA 274
A	LEU 64	GLY 414

There are155 helices in PDB entry 6WRF. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	B	66	78	Right-handed alpha
Helix 2	AA2	B	81	101	Right-handed alpha
Helix 3	AA3	B	124	136	Right-handed alpha
Helix 4	AA4	B	159	169	Right-handed alpha
Helix 5	AA5	B	172	178	Right-handed alpha
Helix 6	AA6	B	186	190	Right-handed 310
Helix 7	AA7	B	204	217	Right-handed alpha
Helix 8	AA8	B	253	263	Right-handed alpha
Helix 9	AA9	B	282	288	Right-handed alpha
Helix 10	AB1	B	291	299	Right-handed alpha
Helix 11	AB2	B	301	307	Right-handed alpha
Helix 12	AB3	B	318	328	Right-handed alpha
Helix 13	AB4	B	332	343	Right-handed alpha
Helix 14	AB5	B	351	366	Right-handed alpha
Helix 15	AB6	B	367	369	Right-handed 310
Helix 16	AB7	B	370	380	Right-handed alpha
Helix 17	AB8	B	380	387	Right-handed alpha
Helix 18	AB9	B	399	405	Right-handed alpha
Helix 19	AC1	C	66	78	Right-handed alpha
Helix 20	AC2	C	81	101	Right-handed alpha
Helix 21	AC3	C	124	136	Right-handed alpha
Helix 22	AC4	C	159	169	Right-handed alpha
Helix 23	AC5	C	172	177	Right-handed alpha
Helix 24	AC6	C	185	189	Right-handed 310
Helix 25	AC7	C	204	217	Right-handed alpha
Helix 26	AC8	C	253	263	Right-handed alpha
Helix 27	AC9	C	282	288	Right-handed alpha
Helix 28	AD1	C	291	299	Right-handed alpha
Helix 29	AD2	C	301	308	Right-handed alpha
Helix 30	AD3	C	318	328	Right-handed alpha
Helix 31	AD4	C	332	343	Right-handed alpha
Helix 32	AD5	C	351	366	Right-handed alpha
Helix 33	AD6	C	369	380	Right-handed alpha
Helix 34	AD7	C	380	387	Right-handed alpha
Helix 35	AD8	C	399	405	Right-handed alpha
Helix 36	AD9	D	66	78	Right-handed alpha
Helix 37	AE1	D	81	101	Right-handed alpha
Helix 38	AE2	D	124	135	Right-handed alpha
Helix 39	AE3	D	146	148	Right-handed 310
Helix 40	AE4	D	159	169	Right-handed alpha
Helix 41	AE5	D	172	177	Right-handed alpha
Helix 42	AE6	D	185	189	Right-handed 310
Helix 43	AE7	D	204	217	Right-handed alpha
Helix 44	AE8	D	253	263	Right-handed alpha
Helix 45	AE9	D	282	288	Right-handed alpha
Helix 46	AF1	D	291	299	Right-handed alpha
Helix 47	AF2	D	301	308	Right-handed alpha
Helix 48	AF3	D	318	328	Right-handed alpha
Helix 49	AF4	D	332	343	Right-handed alpha
Helix 50	AF5	D	351	366	Right-handed alpha
Helix 51	AF6	D	369	380	Right-handed alpha
Helix 52	AF7	D	380	387	Right-handed alpha
Helix 53	AF8	D	399	405	Right-handed alpha
Helix 54	AF9	E	66	78	Right-handed alpha
Helix 55	AG1	E	81	101	Right-handed alpha
Helix 56	AG2	E	124	135	Right-handed alpha
Helix 57	AG3	E	159	169	Right-handed alpha
Helix 58	AG4	E	172	177	Right-handed alpha
Helix 59	AG5	E	186	190	Right-handed 310
Helix 60	AG6	E	204	217	Right-handed alpha
Helix 61	AG7	E	253	263	Right-handed alpha
Helix 62	AG8	E	283	288	Right-handed alpha
Helix 63	AG9	E	291	299	Right-handed alpha
Helix 64	AH1	E	301	308	Right-handed alpha
Helix 65	AH2	E	318	328	Right-handed alpha
Helix 66	AH3	E	332	345	Right-handed alpha
Helix 67	AH4	E	351	365	Right-handed alpha
Helix 68	AH5	E	370	380	Right-handed alpha
Helix 69	AH6	E	380	387	Right-handed alpha
Helix 70	AH7	E	399	405	Right-handed alpha
Helix 71	AH8	F	66	78	Right-handed alpha
Helix 72	AH9	F	81	101	Right-handed alpha
Helix 73	AI1	F	124	136	Right-handed alpha
Helix 74	AI2	F	145	149	Right-handed alpha
Helix 75	AI3	F	153	170	Right-handed alpha
Helix 76	AI4	F	172	178	Right-handed alpha
Helix 77	AI5	F	185	190	Right-handed alpha
Helix 78	AI6	F	205	217	Right-handed alpha
Helix 79	AI7	F	231	235	Right-handed 310
Helix 80	AI8	F	253	263	Right-handed alpha
Helix 81	AI9	F	280	289	Right-handed alpha
Helix 82	AJ1	F	291	299	Right-handed alpha
Helix 83	AJ2	F	301	307	Right-handed alpha
Helix 84	AJ3	F	318	328	Right-handed alpha
Helix 85	AJ4	F	332	343	Right-handed alpha
Helix 86	AJ5	F	351	366	Right-handed alpha
Helix 87	AJ6	F	369	387	Right-handed alpha
Helix 88	AJ7	F	399	405	Right-handed alpha
Helix 89	AJ8	H	19	26	Right-handed alpha
Helix 90	AJ9	H	36	54	Right-handed alpha
Helix 91	AK1	H	70	83	Right-handed alpha
Helix 92	AK2	H	96	105	Right-handed alpha
Helix 93	AK3	H	131	158	Right-handed alpha
Helix 94	AK4	H	160	169	Right-handed alpha
Helix 95	AK5	H	176	183	Right-handed alpha
Helix 96	AK6	I	19	25	Right-handed alpha
Helix 97	AK7	I	36	54	Right-handed alpha
Helix 98	AK8	I	70	83	Right-handed alpha
Helix 99	AK9	I	96	105	Right-handed alpha
Helix 100	AL1	I	131	158	Right-handed alpha
Helix 101	AL2	I	160	169	Right-handed alpha
Helix 102	AL3	I	176	183	Right-handed alpha
Helix 103	AL4	J	19	25	Right-handed alpha
Helix 104	AL5	J	36	54	Right-handed alpha
Helix 105	AL6	J	70	83	Right-handed alpha
Helix 106	AL7	J	96	105	Right-handed alpha
Helix 107	AL8	J	131	158	Right-handed alpha
Helix 108	AL9	J	160	169	Right-handed alpha
Helix 109	AM1	J	176	183	Right-handed alpha
Helix 110	AM2	K	19	25	Right-handed alpha
Helix 111	AM3	K	36	54	Right-handed alpha
Helix 112	AM4	K	69	83	Right-handed alpha
Helix 113	AM5	K	96	105	Right-handed alpha
Helix 114	AM6	K	131	158	Right-handed alpha
Helix 115	AM7	K	160	169	Right-handed alpha
Helix 116	AM8	K	176	183	Right-handed alpha
Helix 117	AM9	L	19	25	Right-handed alpha
Helix 118	AN1	L	36	54	Right-handed alpha
Helix 119	AN2	L	69	83	Right-handed alpha
Helix 120	AN3	L	96	105	Right-handed alpha
Helix 121	AN4	L	131	158	Right-handed alpha
Helix 122	AN5	L	160	169	Right-handed alpha
Helix 123	AN6	L	176	182	Right-handed alpha
Helix 124	AN7	M	19	25	Right-handed alpha
Helix 125	AN8	M	36	54	Right-handed alpha
Helix 126	AN9	M	69	83	Right-handed alpha
Helix 127	AO1	M	96	105	Right-handed alpha
Helix 128	AO2	M	131	158	Right-handed alpha
Helix 129	AO3	M	160	169	Right-handed alpha
Helix 130	AO4	M	176	183	Right-handed alpha
Helix 131	AO5	N	19	25	Right-handed alpha
Helix 132	AO6	N	36	54	Right-handed alpha
Helix 133	AO7	N	69	83	Right-handed alpha
Helix 134	AO8	N	96	105	Right-handed alpha
Helix 135	AO9	N	131	158	Right-handed alpha
Helix 136	AP1	N	160	169	Right-handed alpha
Helix 137	AP2	N	176	182	Right-handed alpha
Helix 138	AP3	A	66	78	Right-handed alpha
Helix 139	AP4	A	81	101	Right-handed alpha
Helix 140	AP5	A	124	136	Right-handed alpha
Helix 141	AP6	A	159	169	Right-handed alpha
Helix 142	AP7	A	172	177	Right-handed alpha
Helix 143	AP8	A	185	190	Right-handed 310
Helix 144	AP9	A	204	217	Right-handed alpha
Helix 145	AQ1	A	253	263	Right-handed alpha
Helix 146	AQ2	A	276	280	Right-handed 310
Helix 147	AQ3	A	291	299	Right-handed alpha
Helix 148	AQ4	A	301	308	Right-handed alpha
Helix 149	AQ5	A	318	328	Right-handed alpha
Helix 150	AQ6	A	332	343	Right-handed alpha
Helix 151	AQ7	A	351	366	Right-handed alpha
Helix 152	AQ8	A	367	369	Right-handed 310
Helix 153	AQ9	A	370	380	Right-handed alpha
Helix 154	AR1	A	380	387	Right-handed alpha
Helix 155	AR2	A	399	405	Right-handed alpha

There are 39 sheets in PDB entry 6WRF. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	140	144	first strand
Strand 2	B	180	184	parallel
Strand 3	B	244	249	parallel
Strand 4	B	115	118	parallel
Strand 5	B	310	313	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	219	222	first strand
Strand 2	B	236	239	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	347	350	first strand
Strand 2	B	393	398	parallel
Strand 3	B	410	413	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	140	144	first strand
Strand 2	C	180	184	parallel
Strand 3	C	244	249	parallel
Strand 4	C	115	118	parallel
Strand 5	C	310	313	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	219	222	first strand
Strand 2	C	236	239	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	347	350	first strand
Strand 2	C	393	398	parallel
Strand 3	C	410	413	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	140	144	first strand
Strand 2	D	180	184	parallel
Strand 3	D	244	249	parallel
Strand 4	D	115	118	parallel
Strand 5	D	310	313	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	219	222	first strand
Strand 2	D	236	239	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	347	350	first strand
Strand 2	D	393	398	parallel
Strand 3	D	410	413	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	140	144	first strand
Strand 2	E	180	184	parallel
Strand 3	E	244	249	parallel
Strand 4	E	115	118	parallel
Strand 5	E	312	313	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	219	222	first strand
Strand 2	E	236	239	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	347	350	first strand
Strand 2	E	393	398	parallel
Strand 3	E	410	413	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	140	144	first strand
Strand 2	F	180	184	parallel
Strand 3	F	244	247	parallel
Strand 4	F	115	118	parallel
Strand 5	F	310	313	parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	219	222	first strand
Strand 2	F	236	239	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	347	350	first strand
Strand 2	F	393	398	parallel
Strand 3	F	410	413	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	5	8	first strand
Strand 2	H	15	18	anti-parallel

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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	28	32	first strand
Strand 2	H	59	65	parallel
Strand 3	H	87	95	parallel
Strand 4	H	118	121	parallel
Strand 5	H	172	175	anti-parallel

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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	28	32	first strand
Strand 2	H	59	65	parallel
Strand 3	H	87	95	parallel
Strand 4	H	112	113	parallel
Strand 5	H	187	188	parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	5	9	first strand
Strand 2	I	14	18	anti-parallel

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There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	28	32	first strand
Strand 2	I	59	65	parallel
Strand 3	I	87	95	parallel
Strand 4	I	118	121	parallel
Strand 5	I	172	175	anti-parallel

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There are 5 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	28	32	first strand
Strand 2	I	59	65	parallel
Strand 3	I	87	95	parallel
Strand 4	I	111	113	parallel
Strand 5	I	187	188	parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	5	9	first strand
Strand 2	J	14	18	anti-parallel

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There are 5 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	28	32	first strand
Strand 2	J	59	65	parallel
Strand 3	J	87	95	parallel
Strand 4	J	118	121	parallel
Strand 5	J	172	175	anti-parallel

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There are 5 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	28	32	first strand
Strand 2	J	59	65	parallel
Strand 3	J	87	95	parallel
Strand 4	J	112	113	parallel
Strand 5	J	187	188	parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	5	10	first strand
Strand 2	K	13	18	anti-parallel

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There are 5 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	28	32	first strand
Strand 2	K	59	65	parallel
Strand 3	K	87	95	parallel
Strand 4	K	118	121	parallel
Strand 5	K	172	175	anti-parallel

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There are 5 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	28	32	first strand
Strand 2	K	59	65	parallel
Strand 3	K	87	95	parallel
Strand 4	K	111	113	parallel
Strand 5	K	187	188	parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	5	10	first strand
Strand 2	L	13	18	anti-parallel

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There are 5 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	28	32	first strand
Strand 2	L	59	65	parallel
Strand 3	L	87	95	parallel
Strand 4	L	111	113	parallel
Strand 5	L	187	188	parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	118	121	first strand
Strand 2	L	172	175	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	5	9	first strand
Strand 2	M	14	18	anti-parallel

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There are 5 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	28	32	first strand
Strand 2	M	59	65	parallel
Strand 3	M	87	95	parallel
Strand 4	M	118	121	parallel
Strand 5	M	172	175	anti-parallel

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There are 5 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	28	32	first strand
Strand 2	M	59	65	parallel
Strand 3	M	87	95	parallel
Strand 4	M	112	113	parallel
Strand 5	M	187	188	parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	5	8	first strand
Strand 2	N	15	18	anti-parallel

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There are 5 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	28	32	first strand
Strand 2	N	59	65	parallel
Strand 3	N	87	95	parallel
Strand 4	N	118	121	parallel
Strand 5	N	172	175	anti-parallel

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There are 5 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	28	32	first strand
Strand 2	N	59	65	parallel
Strand 3	N	87	95	parallel
Strand 4	N	112	113	parallel
Strand 5	N	187	188	parallel

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There are 5 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	140	144	first strand
Strand 2	A	180	184	parallel
Strand 3	A	244	249	parallel
Strand 4	A	115	118	parallel
Strand 5	A	312	313	parallel

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There are 2 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	219	222	first strand
Strand 2	A	236	239	anti-parallel

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There are 3 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	347	350	first strand
Strand 2	A	395	398	parallel
Strand 3	A	411	412	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6WRF

Analysis of interatomic Contacts of Structural Units in PDB entry:
6WRF