Analysis of interatomic Contacts of Structural Units in PDB entry:
6WRV

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6WRV entry

There are 2 chains in PDB entry 6WRV (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ARG 121	GLU 759
B	ARG 121	ALA 746

There are 86 helices in PDB entry 6WRV. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	123	137	Right-handed alpha
Helix 2	AA2	A	139	148	Right-handed alpha
Helix 3	AA3	A	159	176	Right-handed alpha
Helix 4	AA4	A	239	245	Right-handed alpha
Helix 5	AA5	A	263	274	Right-handed alpha
Helix 6	AA6	A	316	320	Right-handed 310
Helix 7	AA7	A	338	347	Right-handed alpha
Helix 8	AA8	A	354	358	Right-handed 310
Helix 9	AA9	A	419	440	Right-handed alpha
Helix 10	AB1	A	455	459	Right-handed 310
Helix 11	AB2	A	460	470	Right-handed alpha
Helix 12	AB3	A	470	475	Right-handed alpha
Helix 13	AB4	A	502	511	Right-handed alpha
Helix 14	AB5	A	527	532	Right-handed 310
Helix 15	AB6	A	540	547	Right-handed alpha
Helix 16	AB7	A	572	580	Right-handed alpha
Helix 17	AB8	A	582	603	Right-handed alpha
Helix 18	AB9	A	612	627	Right-handed alpha
Helix 19	AC1	A	628	635	Right-handed alpha
Helix 20	AC2	A	639	663	Right-handed alpha
Helix 21	AC3	A	667	680	Right-handed alpha
Helix 22	AC4	A	682	686	Right-handed 310
Helix 23	AC5	A	708	718	Right-handed alpha
Helix 24	AC6	A	727	751	Right-handed alpha
Helix 25	AC7	A	752	756	Right-handed 310
Helix 26	AC8	B	123	137	Right-handed alpha
Helix 27	AC9	B	139	148	Right-handed alpha
Helix 28	AD1	B	159	176	Right-handed alpha
Helix 29	AD2	B	239	245	Right-handed alpha
Helix 30	AD3	B	263	274	Right-handed alpha
Helix 31	AD4	B	316	320	Right-handed 310
Helix 32	AD5	B	338	347	Right-handed alpha
Helix 33	AD6	B	354	358	Right-handed 310
Helix 34	AD7	B	419	439	Right-handed alpha
Helix 35	AD8	B	455	459	Right-handed 310
Helix 36	AD9	B	460	470	Right-handed alpha
Helix 37	AE1	B	470	475	Right-handed alpha
Helix 38	AE2	B	502	511	Right-handed alpha
Helix 39	AE3	B	527	532	Right-handed 310
Helix 40	AE4	B	540	547	Right-handed alpha
Helix 41	AE5	B	572	580	Right-handed alpha
Helix 42	AE6	B	582	603	Right-handed alpha
Helix 43	AE7	B	612	627	Right-handed alpha
Helix 44	AE8	B	628	635	Right-handed alpha
Helix 45	AE9	B	639	663	Right-handed alpha
Helix 46	AF1	B	667	680	Right-handed alpha
Helix 47	AF2	B	682	686	Right-handed 310
Helix 48	AF3	B	708	721	Right-handed alpha
Helix 49	AF4	B	727	751	Right-handed alpha
Helix 50	AF5	B	752	756	Right-handed 310
Helix 51	AF6	E	123	137	Right-handed alpha
Helix 52	AF7	E	139	148	Right-handed alpha
Helix 53	AF8	E	159	176	Right-handed alpha
Helix 54	AF9	E	239	245	Right-handed alpha
Helix 55	AG1	E	263	274	Right-handed alpha
Helix 56	AG2	E	316	320	Right-handed 310
Helix 57	AG3	E	338	347	Right-handed alpha
Helix 58	AG4	E	354	358	Right-handed 310
Helix 59	AG5	E	419	439	Right-handed alpha
Helix 60	AG6	E	455	459	Right-handed 310
Helix 61	AG7	E	460	475	Right-handed alpha
Helix 62	AG8	E	502	511	Right-handed alpha
Helix 63	AG9	E	527	532	Right-handed 310
Helix 64	AH1	E	540	547	Right-handed alpha
Helix 65	AH2	E	572	580	Right-handed alpha
Helix 66	AH3	E	582	603	Right-handed alpha
Helix 67	AH4	E	612	627	Right-handed alpha
Helix 68	AH5	E	628	635	Right-handed alpha
Helix 69	AH6	E	639	663	Right-handed alpha
Helix 70	AH7	E	667	680	Right-handed alpha
Helix 71	AH8	E	682	686	Right-handed 310
Helix 72	AH9	E	708	718	Right-handed alpha
Helix 73	AI1	E	727	751	Right-handed alpha
Helix 74	AI2	E	752	756	Right-handed 310
Helix 75	AI3	D	2	21	Right-handed alpha
Helix 76	AI4	D	24	36	Right-handed alpha
Helix 77	AI5	D	46	61	Right-handed alpha
Helix 78	AI6	D	79	93	Right-handed alpha
Helix 79	AI7	C	2	21	Right-handed alpha
Helix 80	AI8	C	24	36	Right-handed alpha
Helix 81	AI9	C	46	61	Right-handed alpha
Helix 82	AJ1	C	79	93	Right-handed alpha
Helix 83	AJ2	F	2	21	Right-handed alpha
Helix 84	AJ3	F	24	36	Right-handed alpha
Helix 85	AJ4	F	46	61	Right-handed alpha
Helix 86	AJ5	F	79	93	Right-handed alpha

There are 15 sheets in PDB entry 6WRV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	180	192	first strand
Strand 2	A	380	393	anti-parallel
Strand 3	A	446	453	anti-parallel
Strand 4	A	398	408	parallel
Strand 5	A	478	483	parallel
Strand 6	A	552	558	parallel
Strand 7	A	493	498	anti-parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	226	230	first strand
Strand 2	A	371	377	anti-parallel
Strand 3	A	199	204	anti-parallel
Strand 4	A	209	214	anti-parallel
Strand 5	D	40	43	anti-parallel
Strand 6	D	72	76	anti-parallel
Strand 7	D	65	69	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	220	221	first strand
Strand 2	A	299	300	parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	232	234	first strand
Strand 2	A	254	258	parallel
Strand 3	A	278	282	parallel
Strand 4	A	334	336	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	349	352	first strand
Strand 2	A	364	367	anti-parallel

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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	180	192	first strand
Strand 2	B	380	393	anti-parallel
Strand 3	B	446	453	anti-parallel
Strand 4	B	398	408	parallel
Strand 5	B	478	483	parallel
Strand 6	B	552	558	parallel
Strand 7	B	493	498	anti-parallel

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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	226	230	first strand
Strand 2	B	371	377	anti-parallel
Strand 3	B	199	204	anti-parallel
Strand 4	B	209	214	anti-parallel
Strand 5	C	40	43	anti-parallel
Strand 6	C	72	76	anti-parallel
Strand 7	C	65	69	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	220	221	first strand
Strand 2	B	299	300	parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	232	234	first strand
Strand 2	B	254	258	parallel
Strand 3	B	278	282	parallel
Strand 4	B	334	336	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	349	352	first strand
Strand 2	B	364	367	anti-parallel

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There are 7 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	180	192	first strand
Strand 2	E	380	393	anti-parallel
Strand 3	E	447	453	anti-parallel
Strand 4	E	402	408	parallel
Strand 5	E	478	483	parallel
Strand 6	E	552	558	parallel
Strand 7	E	493	498	anti-parallel

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There are 7 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	226	230	first strand
Strand 2	E	371	377	anti-parallel
Strand 3	E	199	204	anti-parallel
Strand 4	E	209	214	anti-parallel
Strand 5	F	40	43	anti-parallel
Strand 6	F	72	76	anti-parallel
Strand 7	F	65	69	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	220	221	first strand
Strand 2	E	299	300	parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	232	234	first strand
Strand 2	E	254	258	parallel
Strand 3	E	278	282	parallel
Strand 4	E	334	336	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	349	352	first strand
Strand 2	E	364	367	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6WRV

Analysis of interatomic Contacts of Structural Units in PDB entry:
6WRV