Analysis of interatomic Contacts of Structural Units in PDB entry:
6WRW

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6WRW entry

There are 2 chains in PDB entry 6WRW (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ARG 121	GLU 759
B	ARG 121	ALA 746

There are 53 helices in PDB entry 6WRW. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	123	137	Right-handed alpha
Helix 2	AA2	A	140	148	Right-handed alpha
Helix 3	AA3	A	159	176	Right-handed alpha
Helix 4	AA4	A	239	245	Right-handed alpha
Helix 5	AA5	A	263	274	Right-handed alpha
Helix 6	AA6	A	316	320	Right-handed 310
Helix 7	AA7	A	338	347	Right-handed alpha
Helix 8	AA8	A	354	358	Right-handed 310
Helix 9	AA9	A	418	440	Right-handed alpha
Helix 10	AB1	A	460	470	Right-handed alpha
Helix 11	AB2	A	499	511	Right-handed alpha
Helix 12	AB3	A	528	532	Right-handed 310
Helix 13	AB4	A	540	547	Right-handed alpha
Helix 14	AB5	A	572	580	Right-handed alpha
Helix 15	AB6	A	582	601	Right-handed alpha
Helix 16	AB7	A	612	627	Right-handed alpha
Helix 17	AB8	A	628	635	Right-handed alpha
Helix 18	AB9	A	639	663	Right-handed alpha
Helix 19	AC1	A	667	679	Right-handed alpha
Helix 20	AC2	A	682	686	Right-handed 310
Helix 21	AC3	A	708	717	Right-handed alpha
Helix 22	AC4	A	727	751	Right-handed alpha
Helix 23	AC5	A	752	756	Right-handed 310
Helix 24	AC6	B	123	137	Right-handed alpha
Helix 25	AC7	B	140	148	Right-handed alpha
Helix 26	AC8	B	159	176	Right-handed alpha
Helix 27	AC9	B	239	245	Right-handed alpha
Helix 28	AD1	B	263	274	Right-handed alpha
Helix 29	AD2	B	316	320	Right-handed 310
Helix 30	AD3	B	338	347	Right-handed alpha
Helix 31	AD4	B	418	440	Right-handed alpha
Helix 32	AD5	B	460	470	Right-handed alpha
Helix 33	AD6	B	499	511	Right-handed alpha
Helix 34	AD7	B	528	532	Right-handed 310
Helix 35	AD8	B	540	547	Right-handed alpha
Helix 36	AD9	B	572	580	Right-handed alpha
Helix 37	AE1	B	582	603	Right-handed alpha
Helix 38	AE2	B	612	627	Right-handed alpha
Helix 39	AE3	B	628	635	Right-handed alpha
Helix 40	AE4	B	639	663	Right-handed alpha
Helix 41	AE5	B	667	680	Right-handed alpha
Helix 42	AE6	B	682	686	Right-handed 310
Helix 43	AE7	B	708	722	Right-handed alpha
Helix 44	AE8	B	727	751	Right-handed alpha
Helix 45	AE9	B	752	756	Right-handed 310
Helix 46	AF1	C	2	15	Right-handed alpha
Helix 47	AF2	C	18	31	Right-handed alpha
Helix 48	AF3	C	40	55	Right-handed alpha
Helix 49	AF4	C	73	88	Right-handed alpha
Helix 50	AF5	D	2	15	Right-handed alpha
Helix 51	AF6	D	18	31	Right-handed alpha
Helix 52	AF7	D	40	55	Right-handed alpha
Helix 53	AF8	D	73	88	Right-handed alpha

There are 10 sheets in PDB entry 6WRW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	180	192	first strand
Strand 2	A	380	393	anti-parallel
Strand 3	A	446	453	anti-parallel
Strand 4	A	398	408	parallel
Strand 5	A	478	483	parallel
Strand 6	A	552	558	parallel
Strand 7	A	493	498	anti-parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	226	230	first strand
Strand 2	A	372	377	anti-parallel
Strand 3	A	199	204	anti-parallel
Strand 4	A	209	214	anti-parallel
Strand 5	C	34	37	anti-parallel
Strand 6	C	66	70	anti-parallel
Strand 7	C	59	63	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	220	221	first strand
Strand 2	A	299	300	parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	232	234	first strand
Strand 2	A	254	258	parallel
Strand 3	A	278	282	parallel
Strand 4	A	334	336	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	349	352	first strand
Strand 2	A	364	367	anti-parallel

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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	180	192	first strand
Strand 2	B	380	393	anti-parallel
Strand 3	B	446	453	anti-parallel
Strand 4	B	398	408	parallel
Strand 5	B	478	483	parallel
Strand 6	B	552	558	parallel
Strand 7	B	493	498	anti-parallel

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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	226	230	first strand
Strand 2	B	372	377	anti-parallel
Strand 3	B	199	204	anti-parallel
Strand 4	B	209	214	anti-parallel
Strand 5	D	34	37	anti-parallel
Strand 6	D	66	70	anti-parallel
Strand 7	D	59	63	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	220	221	first strand
Strand 2	B	299	300	parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	232	234	first strand
Strand 2	B	254	258	parallel
Strand 3	B	278	282	parallel
Strand 4	B	334	336	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	349	352	first strand
Strand 2	B	364	367	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6WRW

Analysis of interatomic Contacts of Structural Units in PDB entry:
6WRW