Analysis of interatomic Contacts of Structural Units in PDB entry:
6WSB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6WSB entry

There are 2 chains in PDB entry 6WSB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2GLY 490
B
 SER 2GLY 490
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 39 helices in PDB entry 6WSB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
42 63Right-handed alpha
Helix 2
AA2
A
64 82Right-handed alpha
Helix 3
AA3
A
82 95Right-handed alpha
Helix 4
AA4
A
97 104Right-handed alpha
Helix 5
AA5
A
104 120Right-handed alpha
Helix 6
AA6
A
121 123Right-handed 310
Helix 7
AA7
A
154 169Right-handed alpha
Helix 8
AA8
A
183 196Right-handed alpha
Helix 9
AA9
A
208 218Right-handed alpha
Helix 10
AB1
A
229 245Right-handed alpha
Helix 11
AB2
A
265 279Right-handed alpha
Helix 12
AB3
A
280 283Right-handed 310
Helix 13
AB4
A
297 311Right-handed alpha
Helix 14
AB5
A
329 347Right-handed alpha
Helix 15
AB6
A
359 365Right-handed 310
Helix 16
AB7
A
380 385Right-handed alpha
Helix 17
AB8
A
399 409Right-handed alpha
Helix 18
AB9
A
422 433Right-handed alpha
Helix 19
AC1
A
455 457Right-handed 310
Helix 20
AC2
A
464 471Right-handed alpha
Helix 21
AC3
B
42 63Right-handed alpha
Helix 22
AC4
B
64 82Right-handed alpha
Helix 23
AC5
B
82 95Right-handed alpha
Helix 24
AC6
B
97 102Right-handed alpha
Helix 25
AC7
B
104 120Right-handed alpha
Helix 26
AC8
B
154 169Right-handed alpha
Helix 27
AC9
B
183 196Right-handed alpha
Helix 28
AD1
B
208 218Right-handed alpha
Helix 29
AD2
B
229 245Right-handed alpha
Helix 30
AD3
B
265 279Right-handed alpha
Helix 31
AD4
B
280 283Right-handed 310
Helix 32
AD5
B
297 310Right-handed alpha
Helix 33
AD6
B
329 346Right-handed alpha
Helix 34
AD7
B
359 365Right-handed 310
Helix 35
AD8
B
380 385Right-handed alpha
Helix 36
AD9
B
399 409Right-handed alpha
Helix 37
AE1
B
422 433Right-handed alpha
Helix 38
AE2
B
455 457Right-handed 310
Helix 39
AE3
B
464 471Right-handed alpha
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There are 8 sheets in PDB entry 6WSB. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
6 7first strand
Strand 2
A
34 39parallel
Strand 3
A
23 27anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
9 11first strand
Strand 2
A
14 16anti-parallel
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There are 10 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
127 131first strand
Strand 2
A
134 142anti-parallel
Strand 3
A
473 481anti-parallel
Strand 4
B
437 440parallel
Strand 5
B
415 419parallel
Strand 6
B
257 260parallel
Strand 7
B
290 294parallel
Strand 8
B
391 397parallel
Strand 9
B
371 374parallel
Strand 10
B
349 352anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
202 204first strand
Strand 2
A
172 176parallel
Strand 3
A
145 149parallel
Strand 4
A
223 227parallel
Strand 5
A
247 251parallel
Strand 6
A
459 460anti-parallel
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There are 10 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
349 352first strand
Strand 2
A
371 374anti-parallel
Strand 3
A
391 397parallel
Strand 4
A
290 294parallel
Strand 5
A
257 260parallel
Strand 6
A
415 419parallel
Strand 7
A
437 440parallel
Strand 8
B
473 481parallel
Strand 9
B
134 142anti-parallel
Strand 10
B
127 131anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
6 7first strand
Strand 2
B
34 39parallel
Strand 3
B
23 27anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
9 11first strand
Strand 2
B
14 16anti-parallel
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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
202 204first strand
Strand 2
B
172 176parallel
Strand 3
B
145 149parallel
Strand 4
B
223 227parallel
Strand 5
B
247 251parallel
Strand 6
B
459 460anti-parallel
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