Analysis of interatomic Contacts of Structural Units in PDB entry:
6WSK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6WSK entry

There is 1 chain in PDB entry 6WSK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY -165LEU 164
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 6WSK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
-163 -154Right-handed alpha
Helix 2
AA2
A
-106 -84Right-handed alpha
Helix 3
AA3
A
-81 -74Right-handed alpha
Helix 4
AA4
A
-73 -58Right-handed alpha
Helix 5
AA5
A
-58 -52Right-handed alpha
Helix 6
AA6
A
-51 -42Right-handed alpha
Helix 7
AA7
A
-40 -30Right-handed alpha
Helix 8
AA8
A
-29 -23Right-handed alpha
Helix 9
AA9
A
-23 -9Right-handed alpha
Helix 10
AB1
A
-7 1Right-handed 310
Helix 11
AB2
A
130 135Right-handed 310
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There are 3 sheets in PDB entry 6WSK. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
-152 -147first strand
Strand 2
A
-139 -136anti-parallel
Strand 3
A
-134 -133anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
72 74first strand
Strand 2
A
83 90anti-parallel
Strand 3
A
45 53anti-parallel
Strand 4
A
8 16anti-parallel
Strand 5
A
142 148anti-parallel
Strand 6
A
157 164anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
67 70first strand
Strand 2
A
61 64anti-parallel
Strand 3
A
103 110anti-parallel
Strand 4
A
116 126anti-parallel
Strand 5
A
37 41parallel
Strand 6
A
24 25anti-parallel
Strand 7
A
138 139anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il