Analysis of interatomic Contacts of Structural Units in PDB entry:
6WSL

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6WSL entry

There are 7 chains in PDB entry 6WSL (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	VAL 440
B	MET 1	THR 429
C	VAL 58	ILE 305
D	SER 26	GLU 56
E	MET 1	VAL 440
F	MET 1	THR 429
G	VAL 58	VAL 58

There are 96 helices in PDB entry 6WSL. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	10	27	Right-handed alpha
Helix 2	AA2	A	74	79	Right-handed alpha
Helix 3	AA3	A	103	108	Right-handed alpha
Helix 4	AA4	A	110	124	Right-handed alpha
Helix 5	AA5	A	144	161	Right-handed alpha
Helix 6	AA6	A	184	197	Right-handed alpha
Helix 7	AA7	A	206	211	Right-handed alpha
Helix 8	AA8	A	229	239	Right-handed alpha
Helix 9	AA9	A	287	295	Right-handed alpha
Helix 10	AB1	A	324	337	Right-handed alpha
Helix 11	AB2	A	383	386	Right-handed 310
Helix 12	AB3	A	387	400	Right-handed alpha
Helix 13	AB4	A	405	410	Right-handed alpha
Helix 14	AB5	A	416	435	Right-handed alpha
Helix 15	AB6	B	11	18	Right-handed alpha
Helix 16	AB7	B	20	28	Right-handed alpha
Helix 17	AB8	B	40	44	Right-handed 310
Helix 18	AB9	B	71	78	Right-handed alpha
Helix 19	AC1	B	101	106	Right-handed alpha
Helix 20	AC2	B	108	111	Right-handed 310
Helix 21	AC3	B	112	124	Right-handed alpha
Helix 22	AC4	B	142	159	Right-handed alpha
Helix 23	AC5	B	180	189	Right-handed alpha
Helix 24	AC6	B	189	194	Right-handed alpha
Helix 25	AC7	B	204	213	Right-handed alpha
Helix 26	AC8	B	224	235	Right-handed alpha
Helix 27	AC9	B	249	257	Right-handed alpha
Helix 28	AD1	B	289	294	Right-handed alpha
Helix 29	AD2	B	304	308	Right-handed 310
Helix 30	AD3	B	322	337	Right-handed alpha
Helix 31	AD4	B	338	341	Right-handed 310
Helix 32	AD5	B	374	392	Right-handed alpha
Helix 33	AD6	B	395	400	Right-handed alpha
Helix 34	AD7	B	405	423	Right-handed alpha
Helix 35	AD8	C	73	75	Right-handed 310
Helix 36	AD9	C	76	81	Right-handed alpha
Helix 37	AE1	C	90	94	Right-handed 310
Helix 38	AE2	C	117	130	Right-handed alpha
Helix 39	AE3	C	131	133	Right-handed 310
Helix 40	AE4	C	150	155	Right-handed alpha
Helix 41	AE5	C	157	162	Right-handed alpha
Helix 42	AE6	C	168	179	Right-handed alpha
Helix 43	AE7	C	223	227	Right-handed 310
Helix 44	AE8	C	236	250	Right-handed alpha
Helix 45	AE9	C	286	291	Right-handed alpha
Helix 46	AF1	C	292	305	Right-handed alpha
Helix 47	AF2	D	30	35	Right-handed alpha
Helix 48	AF3	D	35	51	Right-handed alpha
Helix 49	AF4	E	10	27	Right-handed alpha
Helix 50	AF5	E	74	79	Right-handed alpha
Helix 51	AF6	E	103	108	Right-handed alpha
Helix 52	AF7	E	110	124	Right-handed alpha
Helix 53	AF8	E	143	146	Right-handed 310
Helix 54	AF9	E	147	161	Right-handed alpha
Helix 55	AG1	E	184	195	Right-handed alpha
Helix 56	AG2	E	227	239	Right-handed alpha
Helix 57	AG3	E	255	259	Right-handed 310
Helix 58	AG4	E	287	294	Right-handed alpha
Helix 59	AG5	E	295	297	Right-handed 310
Helix 60	AG6	E	324	337	Right-handed alpha
Helix 61	AG7	E	381	387	Right-handed 310
Helix 62	AG8	E	388	400	Right-handed alpha
Helix 63	AG9	E	405	410	Right-handed alpha
Helix 64	AH1	E	414	416	Right-handed 310
Helix 65	AH2	E	417	435	Right-handed alpha
Helix 66	AH3	F	11	16	Right-handed alpha
Helix 67	AH4	F	20	28	Right-handed alpha
Helix 68	AH5	F	40	45	Right-handed alpha
Helix 69	AH6	F	71	78	Right-handed alpha
Helix 70	AH7	F	86	88	Right-handed 310
Helix 71	AH8	F	101	106	Right-handed alpha
Helix 72	AH9	F	109	126	Right-handed alpha
Helix 73	AI1	F	146	159	Right-handed alpha
Helix 74	AI2	F	180	189	Right-handed alpha
Helix 75	AI3	F	189	194	Right-handed alpha
Helix 76	AI4	F	204	211	Right-handed alpha
Helix 77	AI5	F	224	235	Right-handed alpha
Helix 78	AI6	F	249	257	Right-handed alpha
Helix 79	AI7	F	289	294	Right-handed alpha
Helix 80	AI8	F	304	308	Right-handed 310
Helix 81	AI9	F	322	337	Right-handed alpha
Helix 82	AJ1	F	374	392	Right-handed alpha
Helix 83	AJ2	F	395	400	Right-handed alpha
Helix 84	AJ3	F	405	423	Right-handed alpha
Helix 85	AJ4	G	73	75	Right-handed 310
Helix 86	AJ5	G	76	81	Right-handed alpha
Helix 87	AJ6	G	90	94	Right-handed 310
Helix 88	AJ7	G	117	130	Right-handed alpha
Helix 89	AJ8	G	131	133	Right-handed 310
Helix 90	AJ9	G	149	162	Right-handed alpha
Helix 91	AK1	G	168	179	Right-handed alpha
Helix 92	AK2	G	223	227	Right-handed 310
Helix 93	AK3	G	235	249	Right-handed alpha
Helix 94	AK4	G	286	305	Right-handed alpha
Helix 95	AK5	H	30	35	Right-handed alpha
Helix 96	AK6	H	36	51	Right-handed alpha

There are 16 sheets in PDB entry 6WSL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	93	94	first strand
Strand 2	A	65	69	parallel
Strand 3	A	3	9	parallel
Strand 4	A	132	137	parallel
Strand 5	A	165	171	parallel
Strand 6	A	201	204	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	53	55	first strand
Strand 2	A	61	63	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	269	273	first strand
Strand 2	A	373	379	anti-parallel
Strand 3	A	319	321	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	316	317	first strand
Strand 2	A	352	353	parallel

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There are 10 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	90	92	first strand
Strand 2	B	63	67	parallel
Strand 3	B	2	8	parallel
Strand 4	B	129	135	parallel
Strand 5	B	163	166	parallel
Strand 6	B	198	200	parallel
Strand 7	B	265	271	parallel
Strand 8	B	365	371	anti-parallel
Strand 9	B	310	316	anti-parallel
Strand 10	B	349	352	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	169	170	first strand
Strand 2	B	202	203	parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	214	218	first strand
Strand 2	C	201	211	anti-parallel
Strand 3	C	187	196	anti-parallel
Strand 4	C	253	259	anti-parallel
Strand 5	C	278	281	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	6	8	first strand
Strand 2	E	65	69	parallel
Strand 3	E	93	94	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	53	55	first strand
Strand 2	E	61	63	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	134	137	first strand
Strand 2	E	165	171	parallel
Strand 3	E	201	204	parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	272	273	first strand
Strand 2	E	373	376	anti-parallel
Strand 3	E	319	321	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	316	317	first strand
Strand 2	E	352	353	parallel

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There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	90	92	first strand
Strand 2	F	63	67	parallel
Strand 3	F	2	8	parallel
Strand 4	F	129	135	parallel
Strand 5	F	163	166	parallel
Strand 6	F	198	199	parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	169	170	first strand
Strand 2	F	202	203	parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	267	271	first strand
Strand 2	F	365	371	anti-parallel
Strand 3	F	310	316	anti-parallel
Strand 4	F	349	352	parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	214	218	first strand
Strand 2	G	201	211	anti-parallel
Strand 3	G	187	196	anti-parallel
Strand 4	G	253	259	anti-parallel
Strand 5	G	278	281	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6WSL

Analysis of interatomic Contacts of Structural Units in PDB entry:
6WSL