Analysis of interatomic Contacts of Structural Units in PDB entry:
6WT3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6WT3 entry

There are 2 chains in PDB entry 6WT3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
H
 LYS 20ASP 241
L
 GLN 23GLU 234
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 5 helices in PDB entry 6WT3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
H
47 49Right-handed 310
Helix 2
AA2
H
106 110Right-handed 310
Helix 3
AA3
L
100 104Right-handed 310
Helix 4
AA4
L
142 148Right-handed alpha
Helix 5
AA5
L
203 208Right-handed alpha
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There are 10 sheets in PDB entry 6WT3. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
22 25first strand
Strand 2
H
37 44anti-parallel
Strand 3
H
97 102anti-parallel
Strand 4
H
87 91anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
29 31first strand
Strand 2
H
135 138parallel
Strand 3
H
111 119anti-parallel
Strand 4
H
51 58anti-parallel
Strand 5
H
64 71anti-parallel
Strand 6
H
76 79anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
29 31first strand
Strand 2
H
135 138parallel
Strand 3
H
111 119anti-parallel
Strand 4
H
129 130anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
147 151first strand
Strand 2
H
162 172anti-parallel
Strand 3
H
202 211anti-parallel
Strand 4
H
190 192anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
147 151first strand
Strand 2
H
162 172anti-parallel
Strand 3
H
202 211anti-parallel
Strand 4
H
196 197anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
178 181first strand
Strand 2
H
221 226anti-parallel
Strand 3
H
231 236anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
26 28first strand
Strand 2
L
41 47anti-parallel
Strand 3
L
91 96anti-parallel
Strand 4
L
83 86anti-parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
32 35first strand
Strand 2
L
123 127parallel
Strand 3
L
106 111anti-parallel
Strand 4
L
54 59anti-parallel
Strand 5
L
66 69anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
135 139first strand
Strand 2
L
151 160anti-parallel
Strand 3
L
194 202anti-parallel
Strand 4
L
180 184anti-parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
166 171first strand
Strand 2
L
212 218anti-parallel
Strand 3
L
226 231anti-parallel
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