Analysis of interatomic Contacts of Structural Units in PDB entry:
6WT4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6WT4 entry

There are 2 chains in PDB entry 6WT4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 79LEU 235
B
 SER 79GLY 234
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 6WT4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
79 92Right-handed alpha
Helix 2
AA2
A
92 103Right-handed alpha
Helix 3
AA3
A
117 121Right-handed 310
Helix 4
AA4
A
122 136Right-handed alpha
Helix 5
AA5
A
171 175Right-handed 310
Helix 6
AA6
A
176 182Right-handed alpha
Helix 7
AA7
A
194 219Right-handed alpha
Helix 8
AA8
B
80 92Right-handed alpha
Helix 9
AA9
B
92 103Right-handed alpha
Helix 10
AB1
B
117 121Right-handed 310
Helix 11
AB2
B
122 136Right-handed alpha
Helix 12
AB3
B
171 175Right-handed 310
Helix 13
AB4
B
176 181Right-handed alpha
Helix 14
AB5
B
199 219Right-handed alpha
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There are 2 sheets in PDB entry 6WT4. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
138 144first strand
Strand 2
A
155 161anti-parallel
Strand 3
A
166 169anti-parallel
Strand 4
A
109 113parallel
Strand 5
A
225 228parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
138 144first strand
Strand 2
B
155 161anti-parallel
Strand 3
B
166 169anti-parallel
Strand 4
B
109 113parallel
Strand 5
B
225 228parallel
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