Analysis of interatomic Contacts of Structural Units in PDB entry:
6WT5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6WT5 entry

There are 4 chains in PDB entry 6WT5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 152GLU 312
B
 ASP 152GLU 312
C
 ASN 151GLU 312
D
 ASP 154ASP 311
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 6WT5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
152 156Right-handed 310
Helix 2
AA2
A
158 171Right-handed alpha
Helix 3
AA3
A
171 183Right-handed alpha
Helix 4
AA4
A
209 219Right-handed alpha
Helix 5
AA5
A
254 257Right-handed 310
Helix 6
AA6
A
258 268Right-handed alpha
Helix 7
AA7
A
279 301Right-handed alpha
Helix 8
AA8
A
303 305Right-handed 310
Helix 9
AA9
B
152 156Right-handed 310
Helix 10
AB1
B
158 172Right-handed alpha
Helix 11
AB2
B
172 182Right-handed alpha
Helix 12
AB3
B
209 221Right-handed alpha
Helix 13
AB4
B
254 256Right-handed 310
Helix 14
AB5
B
257 268Right-handed alpha
Helix 15
AB6
B
278 302Right-handed alpha
Helix 16
AB7
C
158 171Right-handed alpha
Helix 17
AB8
C
171 183Right-handed alpha
Helix 18
AB9
C
209 221Right-handed alpha
Helix 19
AC1
C
254 257Right-handed 310
Helix 20
AC2
C
258 267Right-handed alpha
Helix 21
AC3
C
281 301Right-handed alpha
Helix 22
AC4
C
303 305Right-handed 310
Helix 23
AC5
D
158 171Right-handed alpha
Helix 24
AC6
D
171 182Right-handed alpha
Helix 25
AC7
D
209 221Right-handed alpha
Helix 26
AC8
D
254 256Right-handed 310
Helix 27
AC9
D
257 268Right-handed alpha
Helix 28
AD1
D
279 301Right-handed alpha
Helix 29
AD2
D
303 305Right-handed 310
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There are 6 sheets in PDB entry 6WT5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
247 252first strand
Strand 2
A
195 202parallel
Strand 3
A
307 311parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
224 228first strand
Strand 2
A
235 239anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
224 230first strand
Strand 2
B
233 239anti-parallel
Strand 3
B
249 252anti-parallel
Strand 4
B
197 202parallel
Strand 5
B
307 311parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
185 186first strand
Strand 2
C
192 193anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
224 230first strand
Strand 2
C
233 242anti-parallel
Strand 3
C
247 252anti-parallel
Strand 4
C
196 202parallel
Strand 5
C
307 311parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
224 228first strand
Strand 2
D
235 239anti-parallel
Strand 3
D
249 252anti-parallel
Strand 4
D
197 201parallel
Strand 5
D
307 310parallel
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