Analysis of interatomic Contacts of Structural Units in PDB entry:
6WT6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6WT6 entry

There is 1 chain in PDB entry 6WT6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 21SER 358
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 6WT6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
42 57Right-handed alpha
Helix 2
AA2
A
63 67Right-handed alpha
Helix 3
AA3
A
73 83Right-handed alpha
Helix 4
AA4
A
92 98Right-handed alpha
Helix 5
AA5
A
99 102Right-handed 310
Helix 6
AA6
A
103 109Right-handed alpha
Helix 7
AA7
A
112 119Right-handed alpha
Helix 8
AA8
A
129 133Right-handed 310
Helix 9
AA9
A
137 141Right-handed 310
Helix 10
AB1
A
152 160Right-handed alpha
Helix 11
AB2
A
175 187Right-handed alpha
Helix 12
AB3
A
187 205Right-handed alpha
Helix 13
AB4
A
229 234Right-handed 310
Helix 14
AB5
A
283 292Right-handed alpha
Helix 15
AB6
A
298 320Right-handed alpha
Helix 16
AB7
A
340 357Right-handed alpha
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There are 2 sheets in PDB entry 6WT6. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
60 62first strand
Strand 2
A
31 36parallel
Strand 3
A
84 91parallel
Strand 4
A
120 124parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
238 243first strand
Strand 2
A
260 266anti-parallel
Strand 3
A
272 279anti-parallel
Strand 4
A
212 221parallel
Strand 5
A
327 332parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il