Analysis of interatomic Contacts of Structural Units in PDB entry:
6WTD


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6WTD entry

There are 16 chains in PDB entry 6WTD (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
K
 GLN 2PHE 74
L
 GLN 2PHE 74
M
 GLN 2GLY 75
N
 GLN 2PHE 74
O
 GLN 2PHE 74
P
 GLN 2PHE 74
Q
 GLN 2PHE 74
R
 GLN 2GLY 75
S
 GLN 2PHE 74
T
 GLN 2PHE 74
8
 PHE 7LEU 48
X
 LEU 26LEU 248
Z
 ASN 53ARG 106
7
 GLU 107MET 173
U
 PRO 19LEU 86
J
 MET 1THR 37
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 88 helices in PDB entry 6WTD. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
K
2 13Right-handed alpha
Helix 2
AA2
K
14 18Right-handed 310
Helix 3
AA3
K
19 37Right-handed alpha
Helix 4
AA4
K
40 42Right-handed 310
Helix 5
AA5
K
43 57Right-handed alpha
Helix 6
AA6
K
58 63Right-handed alpha
Helix 7
AA7
K
64 70Right-handed alpha
Helix 8
AA8
K
71 74Right-handed 310
Helix 9
AA9
L
7 15Right-handed alpha
Helix 10
AB1
L
18 40Right-handed alpha
Helix 11
AB2
L
43 48Right-handed alpha
Helix 12
AB3
L
51 56Right-handed alpha
Helix 13
AB4
L
59 64Right-handed alpha
Helix 14
AB5
L
68 72Right-handed 310
Helix 15
AB6
M
2 12Right-handed alpha
Helix 16
AB7
M
20 40Right-handed alpha
Helix 17
AB8
M
46 59Right-handed alpha
Helix 18
AB9
M
60 62Right-handed 310
Helix 19
AC1
M
65 70Right-handed alpha
Helix 20
AC2
N
4 6Right-handed 310
Helix 21
AC3
N
7 14Right-handed alpha
Helix 22
AC4
N
15 20Right-handed 310
Helix 23
AC5
N
21 26Right-handed alpha
Helix 24
AC6
N
27 37Right-handed alpha
Helix 25
AC7
N
40 42Right-handed 310
Helix 26
AC8
N
43 66Right-handed alpha
Helix 27
AC9
O
4 10Right-handed 310
Helix 28
AD1
O
13 18Right-handed 310
Helix 29
AD2
O
26 37Right-handed alpha
Helix 30
AD3
O
40 42Right-handed 310
Helix 31
AD4
O
43 48Right-handed alpha
Helix 32
AD5
O
51 59Right-handed alpha
Helix 33
AD6
O
61 65Right-handed 310
Helix 34
AD7
O
66 71Right-handed alpha
Helix 35
AD8
P
3 15Right-handed alpha
Helix 36
AD9
P
16 18Right-handed 310
Helix 37
AE1
P
19 32Right-handed alpha
Helix 38
AE2
P
33 40Right-handed alpha
Helix 39
AE3
P
47 64Right-handed alpha
Helix 40
AE4
P
65 69Right-handed 310
Helix 41
AE5
Q
9 14Right-handed alpha
Helix 42
AE6
Q
19 40Right-handed alpha
Helix 43
AE7
Q
46 61Right-handed alpha
Helix 44
AE8
Q
66 71Right-handed alpha
Helix 45
AE9
Q
72 74Right-handed 310
Helix 46
AF1
R
3 11Right-handed alpha
Helix 47
AF2
R
18 38Right-handed alpha
Helix 48
AF3
R
40 44Right-handed 310
Helix 49
AF4
R
47 74Right-handed alpha
Helix 50
AF5
S
5 16Right-handed alpha
Helix 51
AF6
S
19 26Right-handed alpha
Helix 52
AF7
S
27 32Right-handed alpha
Helix 53
AF8
S
33 40Right-handed alpha
Helix 54
AF9
S
43 53Right-handed alpha
Helix 55
AG1
S
53 62Right-handed alpha
Helix 56
AG2
S
63 70Right-handed alpha
Helix 57
AG3
T
5 14Right-handed alpha
Helix 58
AG4
T
15 18Right-handed 310
Helix 59
AG5
T
19 24Right-handed alpha
Helix 60
AG6
T
26 34Right-handed alpha
Helix 61
AG7
T
40 42Right-handed 310
Helix 62
AG8
T
43 60Right-handed alpha
Helix 63
AG9
T
62 65Right-handed 310
Helix 64
AH1
T
66 74Right-handed alpha
Helix 65
AH2
8
9 14Right-handed alpha
Helix 66
AH3
8
17 29Right-handed alpha
Helix 67
AH4
8
33 45Right-handed alpha
Helix 68
AH5
X
32 42Right-handed alpha
Helix 69
AH6
X
56 71Right-handed alpha
Helix 70
AH7
X
71 76Right-handed alpha
Helix 71
AH8
X
85 92Right-handed alpha
Helix 72
AH9
X
92 98Right-handed alpha
Helix 73
AI1
X
114 137Right-handed alpha
Helix 74
AI2
X
138 145Right-handed 310
Helix 75
AI3
X
154 164Right-handed alpha
Helix 76
AI4
X
168 181Right-handed alpha
Helix 77
AI5
X
182 185Right-handed 310
Helix 78
AI6
X
188 200Right-handed alpha
Helix 79
AI7
X
213 245Right-handed alpha
Helix 80
AI8
Z
59 63Right-handed 310
Helix 81
AI9
Z
64 72Right-handed alpha
Helix 82
AJ1
Z
74 103Right-handed alpha
Helix 83
AJ2
7
117 126Right-handed alpha
Helix 84
AJ3
7
135 142Right-handed alpha
Helix 85
AJ4
7
143 155Right-handed alpha
Helix 86
AJ5
U
51 56Right-handed alpha
Helix 87
AJ6
U
63 83Right-handed alpha
Helix 88
AJ7
J
9 27Right-handed alpha
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There are no sheets in PDB entry 6WTD
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