Analysis of interatomic Contacts of Structural Units in PDB entry:
6WTE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6WTE entry

There are 2 chains in PDB entry 6WTE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLN 567
B
 MET 1ALA 565
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 54 helices in PDB entry 6WTE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
19 32Right-handed alpha
Helix 2
AA2
A
42 45Right-handed 310
Helix 3
AA3
A
47 59Right-handed alpha
Helix 4
AA4
A
82 97Right-handed alpha
Helix 5
AA5
A
105 110Right-handed alpha
Helix 6
AA6
A
111 120Right-handed alpha
Helix 7
AA7
A
129 142Right-handed alpha
Helix 8
AA8
A
187 191Right-handed 310
Helix 9
AA9
A
208 215Right-handed alpha
Helix 10
AB1
A
235 241Right-handed alpha
Helix 11
AB2
A
248 262Right-handed alpha
Helix 12
AB3
A
277 295Right-handed alpha
Helix 13
AB4
A
298 303Right-handed 310
Helix 14
AB5
A
315 326Right-handed alpha
Helix 15
AB6
A
338 343Right-handed alpha
Helix 16
AB7
A
356 370Right-handed alpha
Helix 17
AB8
A
386 399Right-handed alpha
Helix 18
AB9
A
417 428Right-handed alpha
Helix 19
AC1
A
449 453Right-handed 310
Helix 20
AC2
A
455 462Right-handed alpha
Helix 21
AC3
A
478 482Right-handed 310
Helix 22
AC4
A
490 504Right-handed alpha
Helix 23
AC5
A
505 506Right-handed 310
Helix 24
AC6
A
507 512Right-handed 310
Helix 25
AC7
A
532 541Right-handed alpha
Helix 26
AC8
A
546 551Right-handed 310
Helix 27
AC9
A
553 567Right-handed alpha
Helix 28
AD1
B
19 32Right-handed alpha
Helix 29
AD2
B
42 45Right-handed 310
Helix 30
AD3
B
47 59Right-handed alpha
Helix 31
AD4
B
82 97Right-handed alpha
Helix 32
AD5
B
105 110Right-handed alpha
Helix 33
AD6
B
111 120Right-handed alpha
Helix 34
AD7
B
129 142Right-handed alpha
Helix 35
AD8
B
187 191Right-handed 310
Helix 36
AD9
B
208 215Right-handed alpha
Helix 37
AE1
B
235 241Right-handed alpha
Helix 38
AE2
B
248 262Right-handed alpha
Helix 39
AE3
B
277 295Right-handed alpha
Helix 40
AE4
B
298 303Right-handed 310
Helix 41
AE5
B
315 326Right-handed alpha
Helix 42
AE6
B
338 343Right-handed alpha
Helix 43
AE7
B
356 370Right-handed alpha
Helix 44
AE8
B
386 399Right-handed alpha
Helix 45
AE9
B
417 428Right-handed alpha
Helix 46
AF1
B
449 453Right-handed 310
Helix 47
AF2
B
455 462Right-handed alpha
Helix 48
AF3
B
478 482Right-handed 310
Helix 49
AF4
B
496 504Right-handed alpha
Helix 50
AF5
B
505 506Right-handed 310
Helix 51
AF6
B
507 512Right-handed 310
Helix 52
AF7
B
533 541Right-handed alpha
Helix 53
AF8
B
546 551Right-handed 310
Helix 54
AF9
B
553 565Right-handed alpha
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There are 9 sheets in PDB entry 6WTE. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
35 40first strand
Strand 2
A
4 9parallel
Strand 3
A
63 67parallel
Strand 4
A
101 104parallel
Strand 5
A
123 124parallel
Strand 6
A
153 156anti-parallel
Strand 7
A
159 162anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
170 171first strand
Strand 2
A
174 175anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
219 221first strand
Strand 2
A
266 269parallel
Strand 3
A
304 309parallel
Strand 4
A
327 335parallel
Strand 5
A
373 380parallel
Strand 6
A
404 409parallel
Strand 7
A
514 515parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
224 225first strand
Strand 2
A
245 246anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
411 412first strand
Strand 2
A
475 476anti-parallel
Strand 3
A
436 437anti-parallel
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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
35 40first strand
Strand 2
B
4 9parallel
Strand 3
B
63 67parallel
Strand 4
B
101 104parallel
Strand 5
B
123 124parallel
Strand 6
B
153 156anti-parallel
Strand 7
B
159 162anti-parallel
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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
219 221first strand
Strand 2
B
266 269parallel
Strand 3
B
304 309parallel
Strand 4
B
327 335parallel
Strand 5
B
373 380parallel
Strand 6
B
404 409parallel
Strand 7
B
514 515parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
224 225first strand
Strand 2
B
245 246anti-parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
411 412first strand
Strand 2
B
475 476anti-parallel
Strand 3
B
436 437anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il