Analysis of interatomic Contacts of Structural Units in PDB entry:
6WTF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6WTF entry

There are 2 chains in PDB entry 6WTF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2ALA 566
B
 SER 2GLU 563
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 48 helices in PDB entry 6WTF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
19 32Right-handed alpha
Helix 2
AA2
A
47 59Right-handed alpha
Helix 3
AA3
A
82 97Right-handed alpha
Helix 4
AA4
A
105 110Right-handed alpha
Helix 5
AA5
A
111 120Right-handed alpha
Helix 6
AA6
A
129 142Right-handed alpha
Helix 7
AA7
A
187 191Right-handed 310
Helix 8
AA8
A
208 217Right-handed alpha
Helix 9
AA9
A
235 241Right-handed alpha
Helix 10
AB1
A
248 262Right-handed alpha
Helix 11
AB2
A
277 295Right-handed alpha
Helix 12
AB3
A
298 303Right-handed 310
Helix 13
AB4
A
315 326Right-handed alpha
Helix 14
AB5
A
338 343Right-handed alpha
Helix 15
AB6
A
356 370Right-handed alpha
Helix 16
AB7
A
386 399Right-handed alpha
Helix 17
AB8
A
417 428Right-handed alpha
Helix 18
AB9
A
449 453Right-handed 310
Helix 19
AC1
A
455 462Right-handed alpha
Helix 20
AC2
A
478 482Right-handed 310
Helix 21
AC3
A
496 506Right-handed alpha
Helix 22
AC4
A
507 512Right-handed 310
Helix 23
AC5
A
532 539Right-handed alpha
Helix 24
AC6
A
553 566Right-handed alpha
Helix 25
AC7
B
19 32Right-handed alpha
Helix 26
AC8
B
47 59Right-handed alpha
Helix 27
AC9
B
82 97Right-handed alpha
Helix 28
AD1
B
105 110Right-handed alpha
Helix 29
AD2
B
111 120Right-handed alpha
Helix 30
AD3
B
129 142Right-handed alpha
Helix 31
AD4
B
187 191Right-handed 310
Helix 32
AD5
B
208 217Right-handed alpha
Helix 33
AD6
B
235 241Right-handed alpha
Helix 34
AD7
B
248 262Right-handed alpha
Helix 35
AD8
B
277 295Right-handed alpha
Helix 36
AD9
B
298 303Right-handed 310
Helix 37
AE1
B
315 326Right-handed alpha
Helix 38
AE2
B
338 343Right-handed alpha
Helix 39
AE3
B
356 370Right-handed alpha
Helix 40
AE4
B
386 399Right-handed alpha
Helix 41
AE5
B
417 428Right-handed alpha
Helix 42
AE6
B
449 453Right-handed 310
Helix 43
AE7
B
455 462Right-handed alpha
Helix 44
AE8
B
478 482Right-handed 310
Helix 45
AE9
B
496 506Right-handed alpha
Helix 46
AF1
B
507 512Right-handed 310
Helix 47
AF2
B
532 541Right-handed alpha
Helix 48
AF3
B
553 563Right-handed alpha
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There are 8 sheets in PDB entry 6WTF. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
35 40first strand
Strand 2
A
4 9parallel
Strand 3
A
63 67parallel
Strand 4
A
101 104parallel
Strand 5
A
123 125parallel
Strand 6
A
152 156anti-parallel
Strand 7
A
159 162anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
219 221first strand
Strand 2
A
266 269parallel
Strand 3
A
304 309parallel
Strand 4
A
327 335parallel
Strand 5
A
373 380parallel
Strand 6
A
404 409parallel
Strand 7
A
514 515parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
224 225first strand
Strand 2
A
245 246anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
411 412first strand
Strand 2
A
475 476anti-parallel
Strand 3
A
436 437anti-parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
35 40first strand
Strand 2
B
4 9parallel
Strand 3
B
63 67parallel
Strand 4
B
101 104parallel
Strand 5
B
123 125parallel
Strand 6
B
152 156anti-parallel
Strand 7
B
159 162anti-parallel
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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
219 221first strand
Strand 2
B
266 269parallel
Strand 3
B
304 309parallel
Strand 4
B
327 335parallel
Strand 5
B
373 380parallel
Strand 6
B
404 409parallel
Strand 7
B
514 515parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
224 225first strand
Strand 2
B
245 246anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
411 412first strand
Strand 2
B
475 476anti-parallel
Strand 3
B
436 437anti-parallel
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