Analysis of interatomic Contacts of Structural Units in PDB entry:
6WU6

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6WU6 entry

There are 12 chains in PDB entry 6WU6 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
B	MET 1	ALA 238
C	GLN 16	TRP 129
D	ASN 11	VAL 115
F	MET 1	ALA 238
G	GLN 16	TRP 129
H	ASN 11	VAL 115
J	MET 1	ALA 238
K	GLN 16	TRP 129
L	ASN 11	VAL 115
A	LYS 2	THR 587
E	LYS 2	THR 587
I	LYS 2	THR 587

There are 90 helices in PDB entry 6WU6. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	B	34	43	Right-handed alpha
Helix 2	AA2	B	107	116	Right-handed alpha
Helix 3	AA3	B	139	143	Right-handed 310
Helix 4	AA4	B	153	158	Right-handed alpha
Helix 5	AA5	B	159	165	Right-handed alpha
Helix 6	AA6	B	172	184	Right-handed alpha
Helix 7	AA7	B	189	200	Right-handed alpha
Helix 8	AA8	B	210	216	Right-handed alpha
Helix 9	AA9	B	221	238	Right-handed alpha
Helix 10	AB1	C	21	53	Right-handed alpha
Helix 11	AB2	C	54	65	Right-handed alpha
Helix 12	AB3	C	67	96	Right-handed alpha
Helix 13	AB4	C	102	129	Right-handed alpha
Helix 14	AB5	D	12	39	Right-handed alpha
Helix 15	AB6	D	44	53	Right-handed alpha
Helix 16	AB7	D	54	83	Right-handed alpha
Helix 17	AB8	D	86	113	Right-handed alpha
Helix 18	AB9	F	34	43	Right-handed alpha
Helix 19	AC1	F	107	116	Right-handed alpha
Helix 20	AC2	F	139	143	Right-handed 310
Helix 21	AC3	F	153	158	Right-handed alpha
Helix 22	AC4	F	159	165	Right-handed alpha
Helix 23	AC5	F	172	184	Right-handed alpha
Helix 24	AC6	F	189	200	Right-handed alpha
Helix 25	AC7	F	210	216	Right-handed alpha
Helix 26	AC8	F	221	238	Right-handed alpha
Helix 27	AC9	G	21	53	Right-handed alpha
Helix 28	AD1	G	54	65	Right-handed alpha
Helix 29	AD2	G	67	96	Right-handed alpha
Helix 30	AD3	G	102	129	Right-handed alpha
Helix 31	AD4	H	12	39	Right-handed alpha
Helix 32	AD5	H	44	53	Right-handed alpha
Helix 33	AD6	H	54	83	Right-handed alpha
Helix 34	AD7	H	86	113	Right-handed alpha
Helix 35	AD8	J	34	43	Right-handed alpha
Helix 36	AD9	J	107	116	Right-handed alpha
Helix 37	AE1	J	139	143	Right-handed 310
Helix 38	AE2	J	153	158	Right-handed alpha
Helix 39	AE3	J	159	165	Right-handed alpha
Helix 40	AE4	J	172	184	Right-handed alpha
Helix 41	AE5	J	189	200	Right-handed alpha
Helix 42	AE6	J	210	216	Right-handed alpha
Helix 43	AE7	J	221	238	Right-handed alpha
Helix 44	AE8	K	21	53	Right-handed alpha
Helix 45	AE9	K	54	65	Right-handed alpha
Helix 46	AF1	K	67	96	Right-handed alpha
Helix 47	AF2	K	102	129	Right-handed alpha
Helix 48	AF3	L	12	39	Right-handed alpha
Helix 49	AF4	L	44	53	Right-handed alpha
Helix 50	AF5	L	54	83	Right-handed alpha
Helix 51	AF6	L	86	113	Right-handed alpha
Helix 52	AF7	A	17	30	Right-handed alpha
Helix 53	AF8	A	40	48	Right-handed 310
Helix 54	AF9	A	64	76	Right-handed alpha
Helix 55	AG1	A	82	101	Right-handed alpha
Helix 56	AG2	A	140	156	Right-handed alpha
Helix 57	AG3	A	205	209	Right-handed 310
Helix 58	AG4	A	223	230	Right-handed alpha
Helix 59	AG5	A	402	418	Right-handed alpha
Helix 60	AG6	A	419	426	Right-handed alpha
Helix 61	AG7	A	436	448	Right-handed alpha
Helix 62	AG8	A	455	471	Right-handed alpha
Helix 63	AG9	A	476	494	Right-handed alpha
Helix 64	AH1	A	508	530	Right-handed alpha
Helix 65	AH2	E	17	30	Right-handed alpha
Helix 66	AH3	E	40	48	Right-handed 310
Helix 67	AH4	E	64	76	Right-handed alpha
Helix 68	AH5	E	82	101	Right-handed alpha
Helix 69	AH6	E	140	156	Right-handed alpha
Helix 70	AH7	E	205	209	Right-handed 310
Helix 71	AH8	E	223	230	Right-handed alpha
Helix 72	AH9	E	402	418	Right-handed alpha
Helix 73	AI1	E	419	426	Right-handed alpha
Helix 74	AI2	E	436	448	Right-handed alpha
Helix 75	AI3	E	455	471	Right-handed alpha
Helix 76	AI4	E	476	494	Right-handed alpha
Helix 77	AI5	E	508	530	Right-handed alpha
Helix 78	AI6	I	17	30	Right-handed alpha
Helix 79	AI7	I	40	48	Right-handed 310
Helix 80	AI8	I	64	76	Right-handed alpha
Helix 81	AI9	I	82	101	Right-handed alpha
Helix 82	AJ1	I	140	156	Right-handed alpha
Helix 83	AJ2	I	205	209	Right-handed 310
Helix 84	AJ3	I	223	230	Right-handed alpha
Helix 85	AJ4	I	402	418	Right-handed alpha
Helix 86	AJ5	I	419	426	Right-handed alpha
Helix 87	AJ6	I	436	448	Right-handed alpha
Helix 88	AJ7	I	455	471	Right-handed alpha
Helix 89	AJ8	I	476	494	Right-handed alpha
Helix 90	AJ9	I	508	530	Right-handed alpha

There are 21 sheets in PDB entry 6WU6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	3	6	first strand
Strand 2	B	22	25	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	66	67	first strand
Strand 2	B	70	71	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	3	6	first strand
Strand 2	F	22	25	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	66	67	first strand
Strand 2	F	70	71	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	3	6	first strand
Strand 2	J	22	25	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	66	67	first strand
Strand 2	J	70	71	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	5	13	first strand
Strand 2	A	191	200	parallel
Strand 3	A	179	182	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	5	13	first strand
Strand 2	A	191	200	parallel
Strand 3	A	377	385	parallel
Strand 4	A	367	371	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	116	117	first strand
Strand 2	A	134	135	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	239	242	first strand
Strand 2	A	352	356	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	556	560	first strand
Strand 2	A	565	569	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	5	13	first strand
Strand 2	E	191	200	parallel
Strand 3	E	179	182	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	5	13	first strand
Strand 2	E	191	200	parallel
Strand 3	E	377	385	parallel
Strand 4	E	367	371	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	116	117	first strand
Strand 2	E	134	135	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	239	242	first strand
Strand 2	E	352	356	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	556	560	first strand
Strand 2	E	565	569	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	5	13	first strand
Strand 2	I	191	200	parallel
Strand 3	I	179	182	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	5	13	first strand
Strand 2	I	191	200	parallel
Strand 3	I	377	385	parallel
Strand 4	I	367	371	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	116	117	first strand
Strand 2	I	134	135	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	239	242	first strand
Strand 2	I	352	356	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	556	560	first strand
Strand 2	I	565	569	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6WU6

Analysis of interatomic Contacts of Structural Units in PDB entry:
6WU6