Analysis of interatomic Contacts of Structural Units in PDB entry:
6WUG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6WUG entry

There is 1 chain in PDB entry 6WUG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ILE 352
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 6WUG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
72 82Right-handed alpha
Helix 2
AA2
A
94 103Right-handed alpha
Helix 3
AA3
A
104 106Right-handed 310
Helix 4
AA4
A
140 153Right-handed alpha
Helix 5
AA5
A
233 235Right-handed 310
Helix 6
AA6
A
250 266Right-handed alpha
Helix 7
AA7
A
292 299Right-handed alpha
Helix 8
AA8
A
300 302Right-handed 310
Helix 9
AA9
A
308 329Right-handed alpha
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There are 3 sheets in PDB entry 6WUG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 6first strand
Strand 2
A
345 350anti-parallel
Strand 3
A
335 340anti-parallel
Strand 4
A
111 117anti-parallel
Strand 5
A
124 127anti-parallel
Strand 6
A
90 93parallel
Strand 7
A
192 200parallel
Strand 8
A
180 189anti-parallel
Strand 9
A
22 29anti-parallel
Strand 10
A
35 36anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
44 45first strand
Strand 2
A
154 155anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
202 203first strand
Strand 2
A
237 243anti-parallel
Strand 3
A
271 277parallel
Strand 4
A
283 290anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il