Analysis of interatomic Contacts of Structural Units in PDB entry:
6WUL

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6WUL entry

There are 6 chains in PDB entry 6WUL (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	TYR 26	ARG 333
B	SER 47	LEU 512
C	SER -32	VAL 424
D	TYR 26	ARG 333
E	SER 47	LEU 512
F	SER -32	VAL 424

There are 72 helices in PDB entry 6WUL. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	39	44	Right-handed alpha
Helix 2	AA2	A	57	62	Right-handed alpha
Helix 3	AA3	A	69	82	Right-handed alpha
Helix 4	AA4	A	119	121	Right-handed 310
Helix 5	AA5	A	122	127	Right-handed alpha
Helix 6	AA6	A	150	162	Right-handed alpha
Helix 7	AA7	A	162	174	Right-handed alpha
Helix 8	AA8	A	175	177	Right-handed 310
Helix 9	AA9	A	178	187	Right-handed alpha
Helix 10	AB1	A	187	192	Right-handed alpha
Helix 11	AB2	A	193	213	Right-handed alpha
Helix 12	AB3	A	235	256	Right-handed alpha
Helix 13	AB4	A	269	286	Right-handed alpha
Helix 14	AB5	A	300	308	Right-handed alpha
Helix 15	AB6	A	311	321	Right-handed alpha
Helix 16	AB7	B	58	67	Right-handed alpha
Helix 17	AB8	B	68	71	Right-handed 310
Helix 18	AB9	B	79	94	Right-handed alpha
Helix 19	AC1	B	255	261	Right-handed alpha
Helix 20	AC2	B	446	463	Right-handed alpha
Helix 21	AC3	C	18	32	Right-handed alpha
Helix 22	AC4	C	43	47	Right-handed 310
Helix 23	AC5	C	66	73	Right-handed alpha
Helix 24	AC6	C	106	121	Right-handed alpha
Helix 25	AC7	C	123	128	Right-handed alpha
Helix 26	AC8	C	141	148	Right-handed alpha
Helix 27	AC9	C	153	156	Right-handed 310
Helix 28	AD1	C	157	170	Right-handed alpha
Helix 29	AD2	C	239	254	Right-handed alpha
Helix 30	AD3	C	268	284	Right-handed alpha
Helix 31	AD4	C	290	300	Right-handed alpha
Helix 32	AD5	C	300	315	Right-handed alpha
Helix 33	AD6	C	316	320	Right-handed 310
Helix 34	AD7	C	338	352	Right-handed alpha
Helix 35	AD8	C	354	378	Right-handed alpha
Helix 36	AD9	C	386	408	Right-handed alpha
Helix 37	AE1	D	39	44	Right-handed alpha
Helix 38	AE2	D	57	62	Right-handed alpha
Helix 39	AE3	D	69	82	Right-handed alpha
Helix 40	AE4	D	119	121	Right-handed 310
Helix 41	AE5	D	122	127	Right-handed alpha
Helix 42	AE6	D	150	162	Right-handed alpha
Helix 43	AE7	D	162	174	Right-handed alpha
Helix 44	AE8	D	175	177	Right-handed 310
Helix 45	AE9	D	178	187	Right-handed alpha
Helix 46	AF1	D	187	192	Right-handed alpha
Helix 47	AF2	D	193	213	Right-handed alpha
Helix 48	AF3	D	235	256	Right-handed alpha
Helix 49	AF4	D	269	286	Right-handed alpha
Helix 50	AF5	D	300	308	Right-handed alpha
Helix 51	AF6	D	311	321	Right-handed alpha
Helix 52	AF7	E	58	67	Right-handed alpha
Helix 53	AF8	E	68	71	Right-handed 310
Helix 54	AF9	E	79	94	Right-handed alpha
Helix 55	AG1	E	255	261	Right-handed alpha
Helix 56	AG2	E	446	463	Right-handed alpha
Helix 57	AG3	F	18	32	Right-handed alpha
Helix 58	AG4	F	43	47	Right-handed 310
Helix 59	AG5	F	66	73	Right-handed alpha
Helix 60	AG6	F	106	121	Right-handed alpha
Helix 61	AG7	F	123	128	Right-handed alpha
Helix 62	AG8	F	141	148	Right-handed alpha
Helix 63	AG9	F	153	156	Right-handed 310
Helix 64	AH1	F	157	170	Right-handed alpha
Helix 65	AH2	F	239	254	Right-handed alpha
Helix 66	AH3	F	268	284	Right-handed alpha
Helix 67	AH4	F	290	300	Right-handed alpha
Helix 68	AH5	F	300	315	Right-handed alpha
Helix 69	AH6	F	316	320	Right-handed 310
Helix 70	AH7	F	338	352	Right-handed alpha
Helix 71	AH8	F	354	378	Right-handed alpha
Helix 72	AH9	F	386	408	Right-handed alpha

There are 14 sheets in PDB entry 6WUL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	87	90	first strand
Strand 2	A	51	54	parallel
Strand 3	A	103	105	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	106	109	first strand
Strand 2	B	128	131	anti-parallel
Strand 3	B	48	52	parallel
Strand 4	C	419	421	anti-parallel

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There are 11 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	167	168	first strand
Strand 2	B	187	191	anti-parallel
Strand 3	B	194	203	anti-parallel
Strand 4	B	222	225	anti-parallel
Strand 5	B	239	242	anti-parallel
Strand 6	B	268	277	anti-parallel
Strand 7	B	290	298	anti-parallel
Strand 8	B	309	316	anti-parallel
Strand 9	B	339	346	anti-parallel
Strand 10	B	395	401	anti-parallel
Strand 11	B	426	428	anti-parallel

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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	235	236	first strand
Strand 2	B	268	277	anti-parallel
Strand 3	B	290	298	anti-parallel
Strand 4	B	309	316	anti-parallel
Strand 5	B	339	346	anti-parallel
Strand 6	B	395	401	anti-parallel
Strand 7	B	416	423	anti-parallel
Strand 8	B	470	476	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	206	210	first strand
Strand 2	B	215	219	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	319	320	first strand
Strand 2	B	335	336	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	40	41	first strand
Strand 2	C	3	7	parallel
Strand 3	C	54	57	anti-parallel
Strand 4	C	63	65	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	87	90	first strand
Strand 2	D	51	54	parallel
Strand 3	D	103	105	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	106	109	first strand
Strand 2	E	128	131	anti-parallel
Strand 3	E	48	52	parallel
Strand 4	F	419	421	anti-parallel

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There are 11 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	167	168	first strand
Strand 2	E	187	191	anti-parallel
Strand 3	E	194	203	anti-parallel
Strand 4	E	222	225	anti-parallel
Strand 5	E	239	242	anti-parallel
Strand 6	E	268	277	anti-parallel
Strand 7	E	290	298	anti-parallel
Strand 8	E	309	316	anti-parallel
Strand 9	E	339	346	anti-parallel
Strand 10	E	395	401	anti-parallel
Strand 11	E	426	428	anti-parallel

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There are 8 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	235	236	first strand
Strand 2	E	268	277	anti-parallel
Strand 3	E	290	298	anti-parallel
Strand 4	E	309	316	anti-parallel
Strand 5	E	339	346	anti-parallel
Strand 6	E	395	401	anti-parallel
Strand 7	E	416	423	anti-parallel
Strand 8	E	470	476	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	206	210	first strand
Strand 2	E	215	219	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	319	320	first strand
Strand 2	E	335	336	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	40	41	first strand
Strand 2	F	3	7	parallel
Strand 3	F	54	57	anti-parallel
Strand 4	F	63	65	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6WUL

Analysis of interatomic Contacts of Structural Units in PDB entry:
6WUL