Analysis of interatomic Contacts of Structural Units in PDB entry:
6WUN

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6WUN entry

There are 4 chains in PDB entry 6WUN (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	TYR 26	ARG 333
B	ARG 59	LEU 512
C	TYR 26	ARG 333
D	ARG 59	LEU 512

There are 36 helices in PDB entry 6WUN. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	38	44	Right-handed alpha
Helix 2	AA2	A	57	62	Right-handed alpha
Helix 3	AA3	A	69	82	Right-handed alpha
Helix 4	AA4	A	119	123	Right-handed 310
Helix 5	AA5	A	150	163	Right-handed alpha
Helix 6	AA6	A	163	174	Right-handed alpha
Helix 7	AA7	A	175	177	Right-handed 310
Helix 8	AA8	A	178	187	Right-handed alpha
Helix 9	AA9	A	193	210	Right-handed alpha
Helix 10	AB1	A	239	255	Right-handed alpha
Helix 11	AB2	A	269	280	Right-handed alpha
Helix 12	AB3	A	280	285	Right-handed alpha
Helix 13	AB4	A	300	308	Right-handed alpha
Helix 14	AB5	A	311	321	Right-handed alpha
Helix 15	AB6	B	60	71	Right-handed alpha
Helix 16	AB7	B	86	97	Right-handed alpha
Helix 17	AB8	B	446	458	Right-handed alpha
Helix 18	AB9	B	458	463	Right-handed alpha
Helix 19	AC1	C	38	44	Right-handed alpha
Helix 20	AC2	C	57	62	Right-handed alpha
Helix 21	AC3	C	69	82	Right-handed alpha
Helix 22	AC4	C	119	123	Right-handed 310
Helix 23	AC5	C	150	163	Right-handed alpha
Helix 24	AC6	C	163	174	Right-handed alpha
Helix 25	AC7	C	175	177	Right-handed 310
Helix 26	AC8	C	178	187	Right-handed alpha
Helix 27	AC9	C	193	210	Right-handed alpha
Helix 28	AD1	C	239	255	Right-handed alpha
Helix 29	AD2	C	269	280	Right-handed alpha
Helix 30	AD3	C	280	285	Right-handed alpha
Helix 31	AD4	C	300	308	Right-handed alpha
Helix 32	AD5	C	311	321	Right-handed alpha
Helix 33	AD6	D	60	71	Right-handed alpha
Helix 34	AD7	D	86	97	Right-handed alpha
Helix 35	AD8	D	446	458	Right-handed alpha
Helix 36	AD9	D	458	463	Right-handed alpha

There are 14 sheets in PDB entry 6WUN. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	87	90	first strand
Strand 2	A	51	54	parallel
Strand 3	A	104	105	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	139	141	first strand
Strand 2	B	154	159	anti-parallel
Strand 3	B	167	173	anti-parallel
Strand 4	B	187	191	anti-parallel
Strand 5	B	194	200	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	206	210	first strand
Strand 2	B	215	219	anti-parallel
Strand 3	B	246	247	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	293	297	first strand
Strand 2	B	310	316	anti-parallel
Strand 3	B	339	340	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	396	397	first strand
Strand 2	B	426	427	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	417	419	first strand
Strand 2	B	471	475	anti-parallel
Strand 3	B	487	488	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	482	483	first strand
Strand 2	B	507	508	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	87	90	first strand
Strand 2	C	51	54	parallel
Strand 3	C	104	105	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	139	141	first strand
Strand 2	D	154	159	anti-parallel
Strand 3	D	167	173	anti-parallel
Strand 4	D	187	191	anti-parallel
Strand 5	D	194	200	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	206	210	first strand
Strand 2	D	215	219	anti-parallel
Strand 3	D	246	247	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	293	297	first strand
Strand 2	D	310	316	anti-parallel
Strand 3	D	339	340	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	396	397	first strand
Strand 2	D	426	427	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	417	419	first strand
Strand 2	D	471	475	anti-parallel
Strand 3	D	487	488	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	482	483	first strand
Strand 2	D	507	508	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6WUN

Analysis of interatomic Contacts of Structural Units in PDB entry:
6WUN