Analysis of interatomic Contacts of Structural Units in PDB entry:
6WUT

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6WUT entry

There are 3 chains in PDB entry 6WUT (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	TYR 26	ARG 333
B	SER 47	LEU 512
C	MET -34	VAL 424

There are 35 helices in PDB entry 6WUT. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	38	45	Right-handed alpha
Helix 2	AA2	A	69	82	Right-handed alpha
Helix 3	AA3	A	92	96	Right-handed 310
Helix 4	AA4	A	119	121	Right-handed 310
Helix 5	AA5	A	122	127	Right-handed alpha
Helix 6	AA6	A	150	174	Right-handed alpha
Helix 7	AA7	A	175	177	Right-handed 310
Helix 8	AA8	A	178	187	Right-handed alpha
Helix 9	AA9	A	193	213	Right-handed alpha
Helix 10	AB1	A	230	234	Right-handed 310
Helix 11	AB2	A	235	256	Right-handed alpha
Helix 12	AB3	A	261	265	Right-handed 310
Helix 13	AB4	A	269	286	Right-handed alpha
Helix 14	AB5	A	300	308	Right-handed alpha
Helix 15	AB6	A	311	325	Right-handed alpha
Helix 16	AB7	B	62	67	Right-handed alpha
Helix 17	AB8	B	79	95	Right-handed alpha
Helix 18	AB9	B	255	261	Right-handed alpha
Helix 19	AC1	B	446	462	Right-handed alpha
Helix 20	AC2	C	18	32	Right-handed alpha
Helix 21	AC3	C	66	73	Right-handed alpha
Helix 22	AC4	C	106	123	Right-handed alpha
Helix 23	AC5	C	123	132	Right-handed alpha
Helix 24	AC6	C	134	139	Right-handed alpha
Helix 25	AC7	C	141	148	Right-handed alpha
Helix 26	AC8	C	157	170	Right-handed alpha
Helix 27	AC9	C	239	254	Right-handed alpha
Helix 28	AD1	C	268	284	Right-handed alpha
Helix 29	AD2	C	292	300	Right-handed alpha
Helix 30	AD3	C	300	315	Right-handed alpha
Helix 31	AD4	C	316	319	Right-handed 310
Helix 32	AD5	C	324	328	Right-handed 310
Helix 33	AD6	C	338	352	Right-handed alpha
Helix 34	AD7	C	357	378	Right-handed alpha
Helix 35	AD8	C	386	408	Right-handed alpha

There are 11 sheets in PDB entry 6WUT. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	30	32	first strand
Strand 2	B	492	494	parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	87	90	first strand
Strand 2	A	51	54	parallel
Strand 3	A	103	105	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	106	107	first strand
Strand 2	B	128	131	anti-parallel
Strand 3	B	49	52	parallel
Strand 4	C	418	420	anti-parallel

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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	138	142	first strand
Strand 2	B	154	159	anti-parallel
Strand 3	B	167	173	anti-parallel
Strand 4	B	179	190	anti-parallel
Strand 5	B	198	210	anti-parallel
Strand 6	B	224	225	anti-parallel
Strand 7	B	235	240	anti-parallel
Strand 8	B	228	229	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	198	210	first strand
Strand 2	B	215	221	anti-parallel
Strand 3	B	246	248	anti-parallel

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There are 10 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	235	240	first strand
Strand 2	B	271	277	anti-parallel
Strand 3	B	290	297	anti-parallel
Strand 4	B	309	320	anti-parallel
Strand 5	B	335	346	anti-parallel
Strand 6	B	395	397	anti-parallel
Strand 7	B	422	428	anti-parallel
Strand 8	B	467	472	anti-parallel
Strand 9	B	486	490	anti-parallel
Strand 10	B	503	504	anti-parallel

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There are 10 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	235	240	first strand
Strand 2	B	271	277	anti-parallel
Strand 3	B	290	297	anti-parallel
Strand 4	B	309	320	anti-parallel
Strand 5	B	335	346	anti-parallel
Strand 6	B	400	401	anti-parallel
Strand 7	B	422	428	anti-parallel
Strand 8	B	467	472	anti-parallel
Strand 9	B	486	490	anti-parallel
Strand 10	B	503	504	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	385	386	first strand
Strand 2	B	389	390	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	405	406	first strand
Strand 2	B	417	418	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	482	483	first strand
Strand 2	B	507	508	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	37	41	first strand
Strand 2	C	3	7	parallel
Strand 3	C	54	57	anti-parallel
Strand 4	C	62	65	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6WUT

Analysis of interatomic Contacts of Structural Units in PDB entry:
6WUT