Analysis of interatomic Contacts of Structural Units in PDB entry:
6WV2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6WV2 entry

There are 3 chains in PDB entry 6WV2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 105HIS 377
B
 ASN 107HIS 377
C
 ASN 107HIS 377
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 6WV2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
107 117Right-handed alpha
Helix 2
AA2
A
119 123Right-handed 310
Helix 3
AA3
A
125 135Right-handed alpha
Helix 4
AA4
A
353 375Right-handed alpha
Helix 5
AA5
B
108 117Right-handed alpha
Helix 6
AA6
B
119 123Right-handed 310
Helix 7
AA7
B
125 135Right-handed alpha
Helix 8
AA8
B
353 375Right-handed alpha
Helix 9
AA9
C
108 117Right-handed alpha
Helix 10
AB1
C
125 135Right-handed alpha
Helix 11
AB2
C
353 374Right-handed alpha
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There are 3 sheets in PDB entry 6WV2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 17 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
142 144first strand
Strand 2
C
148 150parallel
Strand 3
B
167 170parallel
Strand 4
A
179 183parallel
Strand 5
C
193 197parallel
Strand 6
B
207 211parallel
Strand 7
A
218 222parallel
Strand 8
C
234 238parallel
Strand 9
B
246 250parallel
Strand 10
A
256 263parallel
Strand 11
C
276 283parallel
Strand 12
B
295 300parallel
Strand 13
A
310 314parallel
Strand 14
A
317 322anti-parallel
Strand 15
A
328 330anti-parallel
Strand 16
C
334 336parallel
Strand 17
B
340 341parallel
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There are 17 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
142 144first strand
Strand 2
A
148 150parallel
Strand 3
C
167 170parallel
Strand 4
B
179 183parallel
Strand 5
A
193 197parallel
Strand 6
C
207 211parallel
Strand 7
B
218 222parallel
Strand 8
A
234 238parallel
Strand 9
C
246 250parallel
Strand 10
B
256 263parallel
Strand 11
A
276 283parallel
Strand 12
C
295 300parallel
Strand 13
B
310 313parallel
Strand 14
B
318 322anti-parallel
Strand 15
B
328 330anti-parallel
Strand 16
A
334 336parallel
Strand 17
C
340 341parallel
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There are 17 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
340 341first strand
Strand 2
B
334 336parallel
Strand 3
C
328 330parallel
Strand 4
C
317 322anti-parallel
Strand 5
C
310 314anti-parallel
Strand 6
A
295 300parallel
Strand 7
B
276 283parallel
Strand 8
C
256 263parallel
Strand 9
A
246 250parallel
Strand 10
B
234 238parallel
Strand 11
C
218 222parallel
Strand 12
A
207 211parallel
Strand 13
B
193 197parallel
Strand 14
C
179 183parallel
Strand 15
A
167 170parallel
Strand 16
B
148 150parallel
Strand 17
C
142 144parallel
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