Analysis of interatomic Contacts of Structural Units in PDB entry:
6WVA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6WVA entry

There are 2 chains in PDB entry 6WVA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LEU 64
A
 VAL 68GLN 416
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 6WVA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 7Right-handed alpha
Helix 2
AA2
A
56 61Right-handed 310
Helix 3
AA3
A
68 72Right-handed 310
Helix 4
AA4
A
75 81Right-handed 310
Helix 5
AA5
A
82 87Right-handed alpha
Helix 6
AA6
A
150 178Right-handed alpha
Helix 7
AA7
A
181 189Right-handed alpha
Helix 8
AA8
A
202 206Right-handed 310
Helix 9
AA9
A
224 241Right-handed alpha
Helix 10
AB1
A
244 271Right-handed alpha
Helix 11
AB2
A
277 304Right-handed alpha
Helix 12
AB3
A
305 309Right-handed 310
Helix 13
AB4
A
325 328Right-handed 310
Helix 14
AB5
A
408 413Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 6WVA.

There are 12 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
11 22first strand
Strand 2
A
25 36anti-parallel
Strand 3
A
41 48anti-parallel
Strand 4
A
386 396anti-parallel
Strand 5
A
368 377anti-parallel
Strand 6
A
316 324anti-parallel
Strand 7
A
329 339anti-parallel
Strand 8
A
345 356anti-parallel
Strand 9
A
92 100anti-parallel
Strand 10
A
105 115anti-parallel
Strand 11
A
118 128anti-parallel
Strand 12
A
11 22parallel
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