Analysis of interatomic Contacts of Structural Units in PDB entry:
6WVG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6WVG entry

There are 4 chains in PDB entry 6WVG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2LEU 64
A
 VAL 68HIS 453
B
 MET 1LEU 64
B
 VAL 68HIS 450
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 6WVG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 7Right-handed alpha
Helix 2
AA2
A
56 61Right-handed 310
Helix 3
AA3
A
68 72Right-handed 310
Helix 4
AA4
A
75 81Right-handed 310
Helix 5
AA5
A
82 87Right-handed alpha
Helix 6
AA6
A
152 182Right-handed alpha
Helix 7
AA7
A
195 221Right-handed alpha
Helix 8
AA8
A
222 250Right-handed alpha
Helix 9
AA9
A
250 268Right-handed alpha
Helix 10
AB1
A
272 287Right-handed alpha
Helix 11
AB2
A
293 297Right-handed 310
Helix 12
AB3
A
313 325Right-handed alpha
Helix 13
AB4
A
325 353Right-handed alpha
Helix 14
AB5
B
4 9Right-handed 310
Helix 15
AB6
B
56 61Right-handed 310
Helix 16
AB7
B
68 72Right-handed 310
Helix 17
AB8
B
75 81Right-handed 310
Helix 18
AB9
B
82 88Right-handed alpha
Helix 19
AC1
B
152 182Right-handed alpha
Helix 20
AC2
B
195 221Right-handed alpha
Helix 21
AC3
B
222 250Right-handed alpha
Helix 22
AC4
B
250 268Right-handed alpha
Helix 23
AC5
B
272 287Right-handed alpha
Helix 24
AC6
B
293 297Right-handed 310
Helix 25
AC7
B
313 325Right-handed alpha
Helix 26
AC8
B
325 354Right-handed alpha
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There are 2 sheets in PDB entry 6WVG. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 12 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
11 22first strand
Strand 2
A
25 36anti-parallel
Strand 3
A
41 48anti-parallel
Strand 4
A
436 446anti-parallel
Strand 5
A
418 427anti-parallel
Strand 6
A
367 374anti-parallel
Strand 7
A
379 389anti-parallel
Strand 8
A
395 406anti-parallel
Strand 9
A
92 100anti-parallel
Strand 10
A
105 115anti-parallel
Strand 11
A
118 128anti-parallel
Strand 12
A
11 22parallel
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There are 12 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
11 22first strand
Strand 2
B
25 36anti-parallel
Strand 3
B
41 48anti-parallel
Strand 4
B
436 446anti-parallel
Strand 5
B
418 427anti-parallel
Strand 6
B
367 374anti-parallel
Strand 7
B
379 389anti-parallel
Strand 8
B
395 406anti-parallel
Strand 9
B
92 100anti-parallel
Strand 10
B
105 115anti-parallel
Strand 11
B
118 128anti-parallel
Strand 12
B
11 22parallel
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