Analysis of interatomic Contacts of Structural Units in PDB entry:
6WVK

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6WVK entry

There are 7 chains in PDB entry 6WVK (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 5	THR 228
B	GLU 5	THR 228
C	THR 2	GLU 1149
D	VAL 4	SER 1187
E	MET 1	LEU 69
F	MET 1	PHE 61
H	GLN 4	ALA 773

There are135 helices in PDB entry 6WVK. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	16	18	Right-handed 310
Helix 2	AA2	A	31	45	Right-handed alpha
Helix 3	AA3	A	74	83	Right-handed alpha
Helix 4	AA4	A	150	155	Right-handed alpha
Helix 5	AA5	A	205	226	Right-handed alpha
Helix 6	AA6	B	31	47	Right-handed alpha
Helix 7	AA7	B	74	83	Right-handed alpha
Helix 8	AA8	B	110	112	Right-handed 310
Helix 9	AA9	B	150	155	Right-handed alpha
Helix 10	AB1	B	205	221	Right-handed alpha
Helix 11	AB2	B	221	226	Right-handed alpha
Helix 12	AB3	C	30	43	Right-handed alpha
Helix 13	AB4	C	43	48	Right-handed alpha
Helix 14	AB5	C	77	84	Right-handed alpha
Helix 15	AB6	C	191	199	Right-handed alpha
Helix 16	AB7	C	203	211	Right-handed alpha
Helix 17	AB8	C	214	222	Right-handed alpha
Helix 18	AB9	C	228	239	Right-handed alpha
Helix 19	AC1	C	251	258	Right-handed alpha
Helix 20	AC2	C	268	280	Right-handed alpha
Helix 21	AC3	C	281	286	Right-handed alpha
Helix 22	AC4	C	377	392	Right-handed alpha
Helix 23	AC5	C	411	435	Right-handed alpha
Helix 24	AC6	C	444	449	Right-handed alpha
Helix 25	AC7	C	451	465	Right-handed alpha
Helix 26	AC8	C	475	483	Right-handed alpha
Helix 27	AC9	C	507	511	Right-handed 310
Helix 28	AD1	C	568	572	Right-handed 310
Helix 29	AD2	C	614	618	Right-handed 310
Helix 30	AD3	C	622	626	Right-handed 310
Helix 31	AD4	C	628	632	Right-handed 310
Helix 32	AD5	C	633	647	Right-handed alpha
Helix 33	AD6	C	661	671	Right-handed alpha
Helix 34	AD7	C	695	698	Right-handed 310
Helix 35	AD8	C	779	784	Right-handed alpha
Helix 36	AD9	C	896	898	Right-handed 310
Helix 37	AE1	C	967	984	Right-handed alpha
Helix 38	AE2	C	996	1008	Right-handed alpha
Helix 39	AE3	C	1043	1047	Right-handed 310
Helix 40	AE4	C	1077	1087	Right-handed alpha
Helix 41	AE5	C	1088	1098	Right-handed alpha
Helix 42	AE6	C	1102	1116	Right-handed alpha
Helix 43	AE7	C	1125	1137	Right-handed alpha
Helix 44	AE8	D	16	23	Right-handed alpha
Helix 45	AE9	D	48	53	Right-handed alpha
Helix 46	AF1	D	103	108	Right-handed alpha
Helix 47	AF2	D	112	118	Right-handed alpha
Helix 48	AF3	D	121	129	Right-handed alpha
Helix 49	AF4	D	151	163	Right-handed alpha
Helix 50	AF5	D	164	166	Right-handed 310
Helix 51	AF6	D	171	182	Right-handed alpha
Helix 52	AF7	D	183	195	Right-handed alpha
Helix 53	AF8	D	200	219	Right-handed alpha
Helix 54	AF9	D	222	225	Right-handed 310
Helix 55	AG1	D	235	239	Right-handed 310
Helix 56	AG2	D	252	275	Right-handed alpha
Helix 57	AG3	D	277	297	Right-handed alpha
Helix 58	AG4	D	317	322	Right-handed alpha
Helix 59	AG5	D	359	366	Right-handed alpha
Helix 60	AG6	D	366	377	Right-handed alpha
Helix 61	AG7	D	382	392	Right-handed alpha
Helix 62	AG8	D	397	405	Right-handed alpha
Helix 63	AG9	D	419	421	Right-handed 310
Helix 64	AH1	D	439	444	Right-handed 310
Helix 65	AH2	D	462	472	Right-handed alpha
Helix 66	AH3	D	474	478	Right-handed 310
Helix 67	AH4	D	493	504	Right-handed alpha
Helix 68	AH5	D	519	529	Right-handed alpha
Helix 69	AH6	D	550	555	Right-handed alpha
Helix 70	AH7	D	563	568	Right-handed alpha
Helix 71	AH8	D	582	587	Right-handed alpha
Helix 72	AH9	D	603	608	Right-handed alpha
Helix 73	AI1	D	616	631	Right-handed alpha
Helix 74	AI2	D	632	655	Right-handed alpha
Helix 75	AI3	D	668	690	Right-handed alpha
Helix 76	AI4	D	693	720	Right-handed alpha
Helix 77	AI5	D	724	732	Right-handed alpha
Helix 78	AI6	D	737	746	Right-handed alpha
Helix 79	AI7	D	772	779	Right-handed alpha
Helix 80	AI8	D	787	794	Right-handed alpha
Helix 81	AI9	D	798	809	Right-handed alpha
Helix 82	AJ1	D	839	844	Right-handed alpha
Helix 83	AJ2	D	869	879	Right-handed alpha
Helix 84	AJ3	D	888	892	Right-handed 310
Helix 85	AJ4	D	900	904	Right-handed alpha
Helix 86	AJ5	D	918	938	Right-handed alpha
Helix 87	AJ6	D	942	946	Right-handed 310
Helix 88	AJ7	D	952	960	Right-handed alpha
Helix 89	AJ8	D	1030	1038	Right-handed alpha
Helix 90	AJ9	D	1039	1059	Right-handed alpha
Helix 91	AK1	D	1063	1072	Right-handed alpha
Helix 92	AK2	D	1073	1075	Right-handed 310
Helix 93	AK3	D	1096	1104	Right-handed alpha
Helix 94	AK4	D	1122	1128	Right-handed alpha
Helix 95	AK5	D	1141	1153	Right-handed alpha
Helix 96	AK6	D	1160	1168	Right-handed alpha
Helix 97	AK7	D	1173	1176	Right-handed 310
Helix 98	AK8	D	1177	1182	Right-handed alpha
Helix 99	AK9	E	29	37	Right-handed alpha
Helix 100	AL1	E	38	40	Right-handed 310
Helix 101	AL2	E	52	60	Right-handed alpha
Helix 102	AL3	F	5	13	Right-handed alpha
Helix 103	AL4	F	15	33	Right-handed alpha
Helix 104	AL5	F	45	55	Right-handed alpha
Helix 105	AL6	H	5	51	Right-handed alpha
Helix 106	AL7	H	57	98	Right-handed alpha
Helix 107	AL8	H	141	145	Right-handed 310
Helix 108	AL9	H	190	198	Right-handed alpha
Helix 109	AM1	H	201	222	Right-handed alpha
Helix 110	AM2	H	238	254	Right-handed alpha
Helix 111	AM3	H	270	280	Right-handed alpha
Helix 112	AM4	H	292	301	Right-handed alpha
Helix 113	AM5	H	311	319	Right-handed alpha
Helix 114	AM6	H	332	337	Right-handed alpha
Helix 115	AM7	H	341	353	Right-handed alpha
Helix 116	AM8	H	371	382	Right-handed alpha
Helix 117	AM9	H	387	407	Right-handed alpha
Helix 118	AN1	H	409	413	Right-handed 310
Helix 119	AN2	H	415	420	Right-handed alpha
Helix 120	AN3	H	424	439	Right-handed alpha
Helix 121	AN4	H	447	474	Right-handed alpha
Helix 122	AN5	H	479	486	Right-handed alpha
Helix 123	AN6	H	499	514	Right-handed alpha
Helix 124	AN7	H	517	519	Right-handed 310
Helix 125	AN8	H	520	533	Right-handed alpha
Helix 126	AN9	H	552	563	Right-handed alpha
Helix 127	AO1	H	573	577	Right-handed 310
Helix 128	AO2	H	610	621	Right-handed alpha
Helix 129	AO3	H	646	651	Right-handed alpha
Helix 130	AO4	H	652	657	Right-handed alpha
Helix 131	AO5	H	657	663	Right-handed alpha
Helix 132	AO6	H	673	685	Right-handed alpha
Helix 133	AO7	H	708	713	Right-handed alpha
Helix 134	AO8	H	735	744	Right-handed alpha
Helix 135	AO9	H	759	765	Right-handed alpha

There are 44 sheets in PDB entry 6WVK. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	8	14	first strand
Strand 2	A	20	28	anti-parallel
Strand 3	A	188	200	anti-parallel
Strand 4	A	173	185	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	112	113	first strand
Strand 2	A	95	102	anti-parallel
Strand 3	A	135	146	anti-parallel
Strand 4	A	49	58	anti-parallel
Strand 5	A	164	165	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	87	89	first strand
Strand 2	A	118	120	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	105	108	first strand
Strand 2	A	126	130	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	148	149	first strand
Strand 2	A	168	169	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	8	12	first strand
Strand 2	B	20	28	anti-parallel
Strand 3	B	192	200	anti-parallel
Strand 4	B	173	179	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	95	101	first strand
Strand 2	B	136	146	anti-parallel
Strand 3	B	49	58	anti-parallel
Strand 4	B	163	165	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	87	88	first strand
Strand 2	B	119	120	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	105	108	first strand
Strand 2	B	126	130	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	148	149	first strand
Strand 2	B	168	169	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	4	7	first strand
Strand 2	C	13	16	anti-parallel
Strand 3	C	987	988	parallel
Strand 4	C	658	659	parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	62	71	first strand
Strand 2	C	92	100	anti-parallel
Strand 3	C	106	112	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	89	90	first strand
Strand 2	C	116	117	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	125	127	first strand
Strand 2	C	130	134	anti-parallel
Strand 3	C	468	470	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	407	410	first strand
Strand 2	C	136	140	anti-parallel
Strand 3	C	485	487	parallel
Strand 4	C	528	530	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	143	148	first strand
Strand 2	C	158	163	anti-parallel
Strand 3	C	170	174	anti-parallel
Strand 4	C	180	184	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	345	350	first strand
Strand 2	C	360	365	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	536	537	first strand
Strand 2	C	543	550	anti-parallel
Strand 3	C	557	565	anti-parallel

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There are 6 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	536	537	first strand
Strand 2	C	543	550	anti-parallel
Strand 3	C	610	611	anti-parallel
Strand 4	C	574	575	parallel
Strand 5	C	591	595	anti-parallel
Strand 6	C	600	604	anti-parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	674	675	first strand
Strand 2	C	741	744	anti-parallel
Strand 3	C	727	728	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	707	711	first strand
Strand 2	C	689	693	anti-parallel
Strand 3	C	680	686	anti-parallel
Strand 4	C	735	736	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	716	717	first strand
Strand 2	C	723	724	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	748	749	first strand
Strand 2	C	752	753	anti-parallel

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There are 7 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	757	763	first strand
Strand 2	C	955	957	parallel
Strand 3	C	774	778	anti-parallel
Strand 4	C	930	939	parallel
Strand 5	C	924	927	anti-parallel
Strand 6	C	1032	1039	anti-parallel
Strand 7	C	757	763	anti-parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	789	800	first strand
Strand 2	C	905	917	anti-parallel
Strand 3	C	885	894	anti-parallel
Strand 4	C	835	836	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	841	847	first strand
Strand 2	C	873	878	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1073	1075	first strand
Strand 2	D	334	336	anti-parallel

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There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1140	1145	first strand
Strand 2	D	9	14	anti-parallel
Strand 3	D	1155	1157	anti-parallel

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There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	24	27	first strand
Strand 2	D	92	102	parallel
Strand 3	D	227	233	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	135	138	first strand
Strand 2	D	167	169	anti-parallel

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There are 7 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	339	346	first strand
Strand 2	D	436	438	parallel
Strand 3	D	354	358	anti-parallel
Strand 4	D	423	431	parallel
Strand 5	D	410	413	anti-parallel
Strand 6	D	454	458	anti-parallel
Strand 7	D	339	346	anti-parallel

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There are 4 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	515	516	first strand
Strand 2	D	536	540	parallel
Strand 3	D	557	561	anti-parallel
Strand 4	D	595	596	anti-parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	752	753	first strand
Strand 2	D	757	758	anti-parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	812	815	first strand
Strand 2	D	897	899	parallel

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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	824	826	first strand
Strand 2	D	884	886	anti-parallel

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There are 4 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	999	1005	first strand
Strand 2	D	988	994	anti-parallel
Strand 3	D	976	982	anti-parallel
Strand 4	D	1017	1018	anti-parallel

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There are 3 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1093	1095	first strand
Strand 2	D	1077	1080	anti-parallel
Strand 3	D	1116	1119	anti-parallel

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There are 2 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1185	1186	first strand
Strand 2	F	59	60	anti-parallel

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There are 3 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	21	26	first strand
Strand 2	E	2	8	anti-parallel
Strand 3	E	43	50	anti-parallel

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There are 5 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	135	136	first strand
Strand 2	H	115	120	parallel
Strand 3	H	100	108	anti-parallel
Strand 4	H	160	174	anti-parallel
Strand 5	H	151	157	anti-parallel

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There are 5 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	135	136	first strand
Strand 2	H	115	120	parallel
Strand 3	H	100	108	anti-parallel
Strand 4	H	160	174	anti-parallel
Strand 5	H	179	182	anti-parallel

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There are 6 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	289	291	first strand
Strand 2	H	263	266	parallel
Strand 3	H	542	546	parallel
Strand 4	H	567	572	parallel
Strand 5	H	228	233	parallel
Strand 6	H	599	603	parallel

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There are 2 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	306	307	first strand
Strand 2	H	515	516	parallel

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There are 7 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	691	692	first strand
Strand 2	H	703	707	parallel
Strand 3	H	666	670	parallel
Strand 4	H	717	723	parallel
Strand 5	H	746	753	parallel
Strand 6	H	638	640	parallel
Strand 7	H	771	773	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6WVK

Analysis of interatomic Contacts of Structural Units in PDB entry:
6WVK