Analysis of interatomic Contacts of Structural Units in PDB entry:
6WWC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6WWC entry

There are 6 chains in PDB entry 6WWC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 1PRO 217
B
 ASP 1GLU 218
C
 ALA 512PHE 519
D
 GLN 1PRO 217
F
 ALA 512PHE 519
H
 ASP 1GLU 218
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 6WWC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
28 32Right-handed 310
Helix 2
AA2
A
62 65Right-handed 310
Helix 3
AA3
A
87 91Right-handed 310
Helix 4
AA4
A
161 163Right-handed 310
Helix 5
AA5
B
84 88Right-handed 310
Helix 6
AA6
B
126 131Right-handed alpha
Helix 7
AA7
B
188 192Right-handed alpha
Helix 8
AA8
D
28 32Right-handed 310
Helix 9
AA9
D
62 65Right-handed 310
Helix 10
AB1
D
87 91Right-handed 310
Helix 11
AB2
D
161 163Right-handed 310
Helix 12
AB3
D
189 193Right-handed 310
Helix 13
AB4
H
84 88Right-handed 310
Helix 14
AB5
H
126 131Right-handed alpha
Helix 15
AB6
H
188 192Right-handed alpha
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There are 20 sheets in PDB entry 6WWC. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3 6first strand
Strand 2
A
18 25anti-parallel
Strand 3
A
78 83anti-parallel
Strand 4
A
68 73anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
9 12first strand
Strand 2
A
112 116parallel
Strand 3
A
92 99anti-parallel
Strand 4
A
33 39anti-parallel
Strand 5
A
45 51anti-parallel
Strand 6
A
58 60anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
125 129first strand
Strand 2
A
140 150anti-parallel
Strand 3
A
179 189anti-parallel
Strand 4
A
168 170anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
125 129first strand
Strand 2
A
140 150anti-parallel
Strand 3
A
179 189anti-parallel
Strand 4
A
174 176anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
156 159first strand
Strand 2
A
199 204anti-parallel
Strand 3
A
209 214anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
4 7first strand
Strand 2
B
19 25anti-parallel
Strand 3
B
75 80anti-parallel
Strand 4
B
67 72anti-parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
10 14first strand
Strand 2
B
107 112parallel
Strand 3
B
89 95anti-parallel
Strand 4
B
38 43anti-parallel
Strand 5
B
50 54anti-parallel
Strand 6
B
58 59anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
10 14first strand
Strand 2
B
107 112parallel
Strand 3
B
89 95anti-parallel
Strand 4
B
102 103anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
119 123first strand
Strand 2
B
134 144anti-parallel
Strand 3
B
178 187anti-parallel
Strand 4
B
164 168anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
158 160first strand
Strand 2
B
150 155anti-parallel
Strand 3
B
196 203anti-parallel
Strand 4
B
206 215anti-parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
3 5first strand
Strand 2
D
18 25anti-parallel
Strand 3
D
78 83anti-parallel
Strand 4
D
68 73anti-parallel
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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
9 12first strand
Strand 2
D
112 116parallel
Strand 3
D
92 99anti-parallel
Strand 4
D
33 39anti-parallel
Strand 5
D
45 51anti-parallel
Strand 6
D
58 60anti-parallel
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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
125 129first strand
Strand 2
D
141 150anti-parallel
Strand 3
D
179 188anti-parallel
Strand 4
D
168 170anti-parallel
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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
125 129first strand
Strand 2
D
141 150anti-parallel
Strand 3
D
179 188anti-parallel
Strand 4
D
174 176anti-parallel
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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
156 159first strand
Strand 2
D
199 204anti-parallel
Strand 3
D
209 214anti-parallel
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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
4 7first strand
Strand 2
H
19 25anti-parallel
Strand 3
H
75 80anti-parallel
Strand 4
H
67 72anti-parallel
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There are 6 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
10 14first strand
Strand 2
H
107 112parallel
Strand 3
H
89 95anti-parallel
Strand 4
H
38 43anti-parallel
Strand 5
H
50 54anti-parallel
Strand 6
H
58 59anti-parallel
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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
10 14first strand
Strand 2
H
107 112parallel
Strand 3
H
89 95anti-parallel
Strand 4
H
102 103anti-parallel
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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
119 123first strand
Strand 2
H
134 144anti-parallel
Strand 3
H
178 187anti-parallel
Strand 4
H
164 168anti-parallel
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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
158 160first strand
Strand 2
H
149 155anti-parallel
Strand 3
H
196 203anti-parallel
Strand 4
H
206 215anti-parallel
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