Analysis of interatomic Contacts of Structural Units in PDB entry:
6WXI

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6WXI entry

There are 3 chains in PDB entry 6WXI (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 23	GLU 450
B	GLU 23	GLU 450
C	GLU 23	GLU 450

There are 33 helices in PDB entry 6WXI. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	24	36	Right-handed alpha
Helix 2	AA2	A	36	58	Right-handed alpha
Helix 3	AA3	A	59	61	Right-handed 310
Helix 4	AA4	A	99	168	Right-handed alpha
Helix 5	AA5	A	172	209	Right-handed alpha
Helix 6	AA6	A	230	242	Right-handed alpha
Helix 7	AA7	A	242	264	Right-handed alpha
Helix 8	AA8	A	286	290	Right-handed 310
Helix 9	AA9	A	318	386	Right-handed alpha
Helix 10	AB1	A	390	426	Right-handed alpha
Helix 11	AB2	A	430	440	Right-handed alpha
Helix 12	AB3	B	24	36	Right-handed alpha
Helix 13	AB4	B	36	58	Right-handed alpha
Helix 14	AB5	B	59	61	Right-handed 310
Helix 15	AB6	B	99	168	Right-handed alpha
Helix 16	AB7	B	172	209	Right-handed alpha
Helix 17	AB8	B	230	242	Right-handed alpha
Helix 18	AB9	B	242	264	Right-handed alpha
Helix 19	AC1	B	286	290	Right-handed 310
Helix 20	AC2	B	318	386	Right-handed alpha
Helix 21	AC3	B	390	426	Right-handed alpha
Helix 22	AC4	B	430	440	Right-handed alpha
Helix 23	AC5	C	24	36	Right-handed alpha
Helix 24	AC6	C	36	58	Right-handed alpha
Helix 25	AC7	C	59	61	Right-handed 310
Helix 26	AC8	C	99	168	Right-handed alpha
Helix 27	AC9	C	172	209	Right-handed alpha
Helix 28	AD1	C	230	242	Right-handed alpha
Helix 29	AD2	C	242	264	Right-handed alpha
Helix 30	AD3	C	286	290	Right-handed 310
Helix 31	AD4	C	318	386	Right-handed alpha
Helix 32	AD5	C	390	426	Right-handed alpha
Helix 33	AD6	C	430	440	Right-handed alpha

There are 15 sheets in PDB entry 6WXI. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	282	284	first strand
Strand 2	A	83	98	anti-parallel
Strand 3	A	63	76	anti-parallel
Strand 4	B	302	315	anti-parallel
Strand 5	B	269	279	anti-parallel
Strand 6	B	83	98	anti-parallel
Strand 7	B	282	284	anti-parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	282	284	first strand
Strand 2	A	83	98	anti-parallel
Strand 3	A	269	279	anti-parallel
Strand 4	A	302	315	anti-parallel
Strand 5	C	63	76	anti-parallel
Strand 6	C	83	98	anti-parallel
Strand 7	C	282	284	anti-parallel

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There are 11 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	282	284	first strand
Strand 2	A	83	98	anti-parallel
Strand 3	A	63	76	anti-parallel
Strand 4	B	302	315	anti-parallel
Strand 5	B	269	279	anti-parallel
Strand 6	B	83	98	anti-parallel
Strand 7	B	63	76	anti-parallel
Strand 8	C	302	315	anti-parallel
Strand 9	C	269	279	anti-parallel
Strand 10	C	83	98	anti-parallel
Strand 11	C	282	284	anti-parallel

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There are 11 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	282	284	first strand
Strand 2	A	83	98	anti-parallel
Strand 3	A	269	279	anti-parallel
Strand 4	A	302	315	anti-parallel
Strand 5	C	63	76	anti-parallel
Strand 6	C	83	98	anti-parallel
Strand 7	C	269	279	anti-parallel
Strand 8	C	302	315	anti-parallel
Strand 9	B	63	76	anti-parallel
Strand 10	B	83	98	anti-parallel
Strand 11	B	282	284	anti-parallel

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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	282	284	first strand
Strand 2	B	83	98	anti-parallel
Strand 3	B	63	76	anti-parallel
Strand 4	C	302	315	anti-parallel
Strand 5	C	269	279	anti-parallel
Strand 6	C	83	98	anti-parallel
Strand 7	C	282	284	anti-parallel

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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	282	284	first strand
Strand 2	B	83	98	anti-parallel
Strand 3	B	269	279	anti-parallel
Strand 4	B	302	315	anti-parallel
Strand 5	A	63	76	anti-parallel
Strand 6	A	83	98	anti-parallel
Strand 7	A	282	284	anti-parallel

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There are 11 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	282	284	first strand
Strand 2	B	83	98	anti-parallel
Strand 3	B	63	76	anti-parallel
Strand 4	C	302	315	anti-parallel
Strand 5	C	269	279	anti-parallel
Strand 6	C	83	98	anti-parallel
Strand 7	C	63	76	anti-parallel
Strand 8	A	302	315	anti-parallel
Strand 9	A	269	279	anti-parallel
Strand 10	A	83	98	anti-parallel
Strand 11	A	282	284	anti-parallel

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There are 11 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	282	284	first strand
Strand 2	B	83	98	anti-parallel
Strand 3	B	269	279	anti-parallel
Strand 4	B	302	315	anti-parallel
Strand 5	A	63	76	anti-parallel
Strand 6	A	83	98	anti-parallel
Strand 7	A	269	279	anti-parallel
Strand 8	A	302	315	anti-parallel
Strand 9	C	63	76	anti-parallel
Strand 10	C	83	98	anti-parallel
Strand 11	C	282	284	anti-parallel

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There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	282	284	first strand
Strand 2	C	83	98	anti-parallel
Strand 3	C	63	76	anti-parallel
Strand 4	A	302	315	anti-parallel
Strand 5	A	269	279	anti-parallel
Strand 6	A	83	98	anti-parallel
Strand 7	A	282	284	anti-parallel

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There are 7 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	282	284	first strand
Strand 2	C	83	98	anti-parallel
Strand 3	C	269	279	anti-parallel
Strand 4	C	302	315	anti-parallel
Strand 5	B	63	76	anti-parallel
Strand 6	B	83	98	anti-parallel
Strand 7	B	282	284	anti-parallel

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There are 11 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	282	284	first strand
Strand 2	C	83	98	anti-parallel
Strand 3	C	63	76	anti-parallel
Strand 4	A	302	315	anti-parallel
Strand 5	A	269	279	anti-parallel
Strand 6	A	83	98	anti-parallel
Strand 7	A	63	76	anti-parallel
Strand 8	B	302	315	anti-parallel
Strand 9	B	269	279	anti-parallel
Strand 10	B	83	98	anti-parallel
Strand 11	B	282	284	anti-parallel

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There are 11 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	282	284	first strand
Strand 2	C	83	98	anti-parallel
Strand 3	C	269	279	anti-parallel
Strand 4	C	302	315	anti-parallel
Strand 5	B	63	76	anti-parallel
Strand 6	B	83	98	anti-parallel
Strand 7	B	269	279	anti-parallel
Strand 8	B	302	315	anti-parallel
Strand 9	A	63	76	anti-parallel
Strand 10	A	83	98	anti-parallel
Strand 11	A	282	284	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	214	218	first strand
Strand 2	A	441	446	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	214	218	first strand
Strand 2	B	441	446	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	214	218	first strand
Strand 2	C	441	446	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6WXI

Analysis of interatomic Contacts of Structural Units in PDB entry:
6WXI