Analysis of interatomic Contacts of Structural Units in PDB entry:
6X05


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6X05 entry

There are 2 chains in PDB entry 6X05 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 58GLU 481
K
 GLN 3SER 122
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 6X05. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
155 159Right-handed 310
Helix 2
AA2
A
177 182Right-handed 310
Helix 3
AA3
A
185 190Right-handed alpha
Helix 4
AA4
A
191 193Right-handed 310
Helix 5
AA5
A
312 321Right-handed alpha
Helix 6
AA6
A
324 328Right-handed 310
Helix 7
AA7
K
25 31Right-handed alpha
Helix 8
AA8
K
87 91Right-handed 310
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There are 10 sheets in PDB entry 6X05. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
60 63first strand
Strand 2
A
67 72anti-parallel
Strand 3
A
473 479anti-parallel
Strand 4
A
464 469anti-parallel
Strand 5
A
455 460anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
87 91first strand
Strand 2
A
96 100anti-parallel
Strand 3
A
104 109anti-parallel
Strand 4
A
120 123anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
137 141first strand
Strand 2
A
163 168anti-parallel
Strand 3
A
171 175anti-parallel
Strand 4
A
194 197anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
208 214first strand
Strand 2
A
218 223anti-parallel
Strand 3
A
228 234anti-parallel
Strand 4
A
240 247anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
267 277first strand
Strand 2
A
280 287anti-parallel
Strand 3
A
291 298anti-parallel
Strand 4
A
305 311anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
332 338first strand
Strand 2
A
344 353anti-parallel
Strand 3
A
358 369anti-parallel
Strand 4
A
374 382anti-parallel
Strand 5
K
102 104anti-parallel
Strand 6
K
107 108anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
398 400first strand
Strand 2
A
413 420anti-parallel
Strand 3
A
423 430anti-parallel
Strand 4
A
442 448anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
4 7first strand
Strand 2
K
18 24anti-parallel
Strand 3
K
79 83anti-parallel
Strand 4
K
68 72anti-parallel
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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
10 13first strand
Strand 2
K
116 121parallel
Strand 3
K
92 100anti-parallel
Strand 4
K
32 40anti-parallel
Strand 5
K
47 53anti-parallel
Strand 6
K
58 60anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
10 13first strand
Strand 2
K
116 121parallel
Strand 3
K
92 100anti-parallel
Strand 4
K
111 112anti-parallel
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