Analysis of interatomic Contacts of Structural Units in PDB entry:
6X06


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6X06 entry

There are 2 chains in PDB entry 6X06 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ILE 714
K
 GLN 1SER 124
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 6X06. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
135 140Right-handed alpha
Helix 2
AA2
A
370 373Right-handed 310
Helix 3
AA3
A
385 393Right-handed alpha
Helix 4
AA4
A
404 415Right-handed alpha
Helix 5
AA5
A
416 430Right-handed alpha
Helix 6
AA6
A
440 458Right-handed alpha
Helix 7
AA7
A
488 496Right-handed alpha
Helix 8
AA8
A
506 518Right-handed alpha
Helix 9
AA9
A
521 538Right-handed alpha
Helix 10
AB1
A
545 557Right-handed alpha
Helix 11
AB2
A
563 575Right-handed alpha
Helix 12
AB3
A
578 588Right-handed alpha
Helix 13
AB4
A
609 640Right-handed alpha
Helix 14
AB5
A
647 670Right-handed alpha
Helix 15
AB6
A
671 683Right-handed alpha
Helix 16
AB7
A
694 711Right-handed alpha
Helix 17
AB8
K
87 91Right-handed 310
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There are 10 sheets in PDB entry 6X06. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4 10first strand
Strand 2
A
480 486anti-parallel
Strand 3
A
470 475anti-parallel
Strand 4
A
460 466anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
23 26first strand
Strand 2
A
92 95parallel
Strand 3
A
80 83anti-parallel
Strand 4
A
67 71anti-parallel
Strand 5
A
57 61anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
108 112first strand
Strand 2
A
116 122anti-parallel
Strand 3
A
128 134anti-parallel
Strand 4
A
151 153anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
167 169first strand
Strand 2
A
173 177anti-parallel
Strand 3
A
183 186anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
226 229first strand
Strand 2
A
233 236anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
280 283first strand
Strand 2
A
286 291anti-parallel
Strand 3
A
297 301anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
330 337first strand
Strand 2
A
349 357anti-parallel
Strand 3
A
360 368anti-parallel
Strand 4
A
376 379anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
4 7first strand
Strand 2
K
18 24anti-parallel
Strand 3
K
78 83anti-parallel
Strand 4
K
68 72anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
11 13first strand
Strand 2
K
121 123parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
45 46first strand
Strand 2
K
37 39anti-parallel
Strand 3
K
93 95anti-parallel
Strand 4
K
118 119anti-parallel
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