Analysis of interatomic Contacts of Structural Units in PDB entry:
6X07


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6X07 entry

There are 2 chains in PDB entry 6X07 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 199LEU 839
B
 VAL 2SER 118
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 44 helices in PDB entry 6X07. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
201 204Right-handed 310
Helix 2
AA2
A
205 229Right-handed alpha
Helix 3
AA3
A
233 245Right-handed alpha
Helix 4
AA4
A
247 264Right-handed alpha
Helix 5
AA5
A
269 290Right-handed alpha
Helix 6
AA6
A
301 313Right-handed alpha
Helix 7
AA7
A
333 343Right-handed alpha
Helix 8
AA8
A
345 356Right-handed alpha
Helix 9
AA9
A
357 360Right-handed 310
Helix 10
AB1
A
364 376Right-handed alpha
Helix 11
AB2
A
383 398Right-handed alpha
Helix 12
AB3
A
405 417Right-handed alpha
Helix 13
AB4
A
425 429Right-handed 310
Helix 14
AB5
A
431 443Right-handed alpha
Helix 15
AB6
A
445 449Right-handed 310
Helix 16
AB7
A
458 470Right-handed alpha
Helix 17
AB8
A
471 474Right-handed 310
Helix 18
AB9
A
477 485Right-handed alpha
Helix 19
AC1
A
487 497Right-handed alpha
Helix 20
AC2
A
499 513Right-handed alpha
Helix 21
AC3
A
533 542Right-handed alpha
Helix 22
AC4
A
543 546Right-handed 310
Helix 23
AC5
A
549 558Right-handed alpha
Helix 24
AC6
A
559 563Right-handed 310
Helix 25
AC7
A
567 584Right-handed alpha
Helix 26
AC8
A
585 590Right-handed alpha
Helix 27
AC9
A
602 607Right-handed alpha
Helix 28
AD1
A
608 612Right-handed 310
Helix 29
AD2
A
618 635Right-handed alpha
Helix 30
AD3
A
636 647Right-handed alpha
Helix 31
AD4
A
649 668Right-handed alpha
Helix 32
AD5
A
684 697Right-handed alpha
Helix 33
AD6
A
699 704Right-handed alpha
Helix 34
AD7
A
707 729Right-handed alpha
Helix 35
AD8
A
731 742Right-handed alpha
Helix 36
AD9
A
749 761Right-handed alpha
Helix 37
AE1
A
764 769Right-handed alpha
Helix 38
AE2
A
770 790Right-handed alpha
Helix 39
AE3
A
798 821Right-handed alpha
Helix 40
AE4
A
822 824Right-handed 310
Helix 41
AE5
A
827 837Right-handed alpha
Helix 42
AE6
B
61 64Right-handed 310
Helix 43
AE7
B
86 90Right-handed 310
Helix 44
AE8
B
101 105Right-handed 310
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There are 4 sheets in PDB entry 6X07. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
327 328first strand
Strand 2
A
331 332anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
591 593first strand
Strand 2
A
599 601anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
3 7first strand
Strand 2
B
18 25anti-parallel
Strand 3
B
77 82anti-parallel
Strand 4
B
67 72anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
11 13first strand
Strand 2
B
112 117parallel
Strand 3
B
91 97anti-parallel
Strand 4
B
34 39anti-parallel
Strand 5
B
45 51anti-parallel
Strand 6
B
57 59anti-parallel
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