Analysis of interatomic Contacts of Structural Units in PDB entry:
6X0H

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6X0H entry

There are 3 chains in PDB entry 6X0H (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ARG 30	ARG 489
B	LEU 31	LEU 487
C	LEU 31	ARG 423

There are 81 helices in PDB entry 6X0H. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	48	62	Right-handed alpha
Helix 2	AA2	A	67	71	Right-handed 310
Helix 3	AA3	A	91	95	Right-handed 310
Helix 4	AA4	A	104	108	Right-handed 310
Helix 5	AA5	A	120	128	Right-handed alpha
Helix 6	AA6	A	130	136	Right-handed alpha
Helix 7	AA7	A	143	157	Right-handed alpha
Helix 8	AA8	A	231	240	Right-handed alpha
Helix 9	AA9	A	255	269	Right-handed alpha
Helix 10	AB1	A	289	294	Right-handed alpha
Helix 11	AB2	A	295	298	Right-handed 310
Helix 12	AB3	A	299	307	Right-handed alpha
Helix 13	AB4	A	308	319	Right-handed alpha
Helix 14	AB5	A	328	346	Right-handed alpha
Helix 15	AB6	A	348	352	Right-handed 310
Helix 16	AB7	A	410	416	Right-handed alpha
Helix 17	AB8	A	417	423	Right-handed 310
Helix 18	AB9	A	457	462	Right-handed alpha
Helix 19	AC1	A	463	467	Right-handed 310
Helix 20	AC2	A	470	489	Right-handed alpha
Helix 21	AC3	B	48	62	Right-handed alpha
Helix 22	AC4	B	91	95	Right-handed 310
Helix 23	AC5	B	104	108	Right-handed 310
Helix 24	AC6	B	120	128	Right-handed alpha
Helix 25	AC7	B	130	136	Right-handed alpha
Helix 26	AC8	B	143	157	Right-handed alpha
Helix 27	AC9	B	158	160	Right-handed 310
Helix 28	AD1	B	231	240	Right-handed alpha
Helix 29	AD2	B	255	269	Right-handed alpha
Helix 30	AD3	B	291	298	Right-handed 310
Helix 31	AD4	B	299	307	Right-handed alpha
Helix 32	AD5	B	308	319	Right-handed alpha
Helix 33	AD6	B	328	346	Right-handed alpha
Helix 34	AD7	B	348	352	Right-handed 310
Helix 35	AD8	B	410	416	Right-handed alpha
Helix 36	AD9	B	417	423	Right-handed 310
Helix 37	AE1	B	457	462	Right-handed alpha
Helix 38	AE2	B	463	467	Right-handed 310
Helix 39	AE3	B	470	484	Right-handed alpha
Helix 40	AE4	C	48	62	Right-handed alpha
Helix 41	AE5	C	67	73	Right-handed 310
Helix 42	AE6	C	91	95	Right-handed 310
Helix 43	AE7	C	104	108	Right-handed 310
Helix 44	AE8	C	120	128	Right-handed alpha
Helix 45	AE9	C	130	136	Right-handed alpha
Helix 46	AF1	C	143	157	Right-handed alpha
Helix 47	AF2	C	158	160	Right-handed 310
Helix 48	AF3	C	231	240	Right-handed alpha
Helix 49	AF4	C	255	269	Right-handed alpha
Helix 50	AF5	C	289	294	Right-handed alpha
Helix 51	AF6	C	295	298	Right-handed 310
Helix 52	AF7	C	299	307	Right-handed alpha
Helix 53	AF8	C	308	319	Right-handed alpha
Helix 54	AF9	C	320	323	Right-handed 310
Helix 55	AG1	C	328	346	Right-handed alpha
Helix 56	AG2	C	348	352	Right-handed 310
Helix 57	AG3	C	410	416	Right-handed alpha
Helix 58	AG4	C	417	423	Right-handed 310
Helix 59	AG5	C	457	462	Right-handed alpha
Helix 60	AG6	C	463	467	Right-handed 310
Helix 61	AG7	C	470	488	Right-handed alpha
Helix 62	AG8	D	48	62	Right-handed alpha
Helix 63	AG9	D	67	71	Right-handed 310
Helix 64	AH1	D	91	95	Right-handed 310
Helix 65	AH2	D	104	108	Right-handed 310
Helix 66	AH3	D	120	128	Right-handed alpha
Helix 67	AH4	D	130	136	Right-handed alpha
Helix 68	AH5	D	143	156	Right-handed alpha
Helix 69	AH6	D	157	159	Right-handed 310
Helix 70	AH7	D	231	240	Right-handed alpha
Helix 71	AH8	D	255	269	Right-handed alpha
Helix 72	AH9	D	291	298	Right-handed 310
Helix 73	AI1	D	299	307	Right-handed alpha
Helix 74	AI2	D	308	318	Right-handed alpha
Helix 75	AI3	D	328	346	Right-handed alpha
Helix 76	AI4	D	348	352	Right-handed 310
Helix 77	AI5	D	411	416	Right-handed alpha
Helix 78	AI6	D	417	423	Right-handed 310
Helix 79	AI7	D	457	462	Right-handed alpha
Helix 80	AI8	D	463	467	Right-handed 310
Helix 81	AI9	D	470	488	Right-handed alpha

There are 20 sheets in PDB entry 6X0H. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	162	163	first strand
Strand 2	A	79	82	parallel
Strand 3	A	40	45	parallel
Strand 4	A	198	208	parallel
Strand 5	A	185	192	anti-parallel
Strand 6	A	166	174	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	162	163	first strand
Strand 2	A	79	82	parallel
Strand 3	A	40	45	parallel
Strand 4	A	198	208	parallel
Strand 5	A	450	453	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	213	214	first strand
Strand 2	A	407	408	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	226	228	first strand
Strand 2	A	400	403	parallel
Strand 3	A	248	252	parallel
Strand 4	A	273	277	parallel
Strand 5	A	355	357	parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	360	366	first strand
Strand 2	A	374	380	anti-parallel
Strand 3	A	393	398	anti-parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	162	164	first strand
Strand 2	B	79	83	parallel
Strand 3	B	39	45	parallel
Strand 4	B	198	208	parallel
Strand 5	B	185	192	anti-parallel
Strand 6	B	166	174	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	162	164	first strand
Strand 2	B	79	83	parallel
Strand 3	B	39	45	parallel
Strand 4	B	198	208	parallel
Strand 5	B	450	453	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	213	214	first strand
Strand 2	B	407	408	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	226	228	first strand
Strand 2	B	400	403	parallel
Strand 3	B	248	252	parallel
Strand 4	B	273	277	parallel
Strand 5	B	355	357	parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	360	366	first strand
Strand 2	B	374	380	anti-parallel
Strand 3	B	395	398	anti-parallel

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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	162	163	first strand
Strand 2	C	79	82	parallel
Strand 3	C	40	45	parallel
Strand 4	C	198	208	parallel
Strand 5	C	185	192	anti-parallel
Strand 6	C	166	174	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	162	163	first strand
Strand 2	C	79	82	parallel
Strand 3	C	40	45	parallel
Strand 4	C	198	208	parallel
Strand 5	C	450	453	parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	213	214	first strand
Strand 2	C	407	408	anti-parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	226	228	first strand
Strand 2	C	400	403	parallel
Strand 3	C	248	252	parallel
Strand 4	C	273	277	parallel
Strand 5	C	355	357	parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	360	366	first strand
Strand 2	C	374	380	anti-parallel
Strand 3	C	395	398	anti-parallel

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There are 6 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	162	164	first strand
Strand 2	D	79	83	parallel
Strand 3	D	40	45	parallel
Strand 4	D	198	208	parallel
Strand 5	D	185	192	anti-parallel
Strand 6	D	166	174	anti-parallel

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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	162	164	first strand
Strand 2	D	79	83	parallel
Strand 3	D	40	45	parallel
Strand 4	D	198	208	parallel
Strand 5	D	450	453	parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	213	214	first strand
Strand 2	D	407	408	anti-parallel

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There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	226	228	first strand
Strand 2	D	400	403	parallel
Strand 3	D	248	252	parallel
Strand 4	D	273	277	parallel
Strand 5	D	355	357	parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	360	366	first strand
Strand 2	D	374	380	anti-parallel
Strand 3	D	395	398	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6X0H

Analysis of interatomic Contacts of Structural Units in PDB entry:
6X0H