Analysis of interatomic Contacts of Structural Units in PDB entry:
6X0L

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6X0L entry

There are 7 chains in PDB entry 6X0L (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
O	SER 35	LEU 344
P	GLY 77	TRP 570
R	ALA 79	GLN 192
I	C -83	C -74
J	G 74	G 83
i	G 74	G 83
j	C -83	C -74

There are 30 helices in PDB entry 6X0L. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	O	37	46	Right-handed alpha
Helix 2	AA2	O	50	64	Right-handed alpha
Helix 3	AA3	O	72	77	Right-handed alpha
Helix 4	AA4	O	82	88	Right-handed alpha
Helix 5	AA5	O	160	176	Right-handed alpha
Helix 6	AA6	O	182	200	Right-handed alpha
Helix 7	AA7	O	207	217	Right-handed alpha
Helix 8	AA8	O	244	257	Right-handed alpha
Helix 9	AA9	O	260	268	Right-handed alpha
Helix 10	AB1	O	268	284	Right-handed alpha
Helix 11	AB2	O	286	301	Right-handed alpha
Helix 12	AB3	O	302	304	Right-handed 310
Helix 13	AB4	O	305	320	Right-handed alpha
Helix 14	AB5	O	322	335	Right-handed alpha
Helix 15	AB6	P	155	172	Right-handed alpha
Helix 16	AB7	P	222	233	Right-handed alpha
Helix 17	AB8	P	234	248	Right-handed alpha
Helix 18	AB9	P	258	278	Right-handed alpha
Helix 19	AC1	P	282	296	Right-handed alpha
Helix 20	AC2	P	310	334	Right-handed alpha
Helix 21	AC3	P	343	353	Right-handed alpha
Helix 22	AC4	P	363	376	Right-handed alpha
Helix 23	AC5	P	398	403	Right-handed alpha
Helix 24	AC6	P	421	429	Right-handed alpha
Helix 25	AC7	P	438	442	Right-handed 310
Helix 26	AC8	P	453	459	Right-handed alpha
Helix 27	AC9	P	460	462	Right-handed 310
Helix 28	AD1	P	511	515	Right-handed 310
Helix 29	AD2	P	550	552	Right-handed 310
Helix 30	AD3	R	155	172	Right-handed alpha

There are 11 sheets in PDB entry 6X0L. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	79	80	first strand
Strand 2	O	115	120	anti-parallel
Strand 3	O	127	132	anti-parallel
Strand 4	O	142	147	anti-parallel
Strand 5	O	155	156	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	92	94	first strand
Strand 2	P	115	126	anti-parallel
Strand 3	P	132	139	anti-parallel
Strand 4	P	146	151	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	92	94	first strand
Strand 2	P	115	126	anti-parallel
Strand 3	P	103	110	anti-parallel
Strand 4	P	189	191	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	96	97	first strand
Strand 2	P	100	101	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	354	358	first strand
Strand 2	P	384	396	anti-parallel
Strand 3	P	554	566	anti-parallel
Strand 4	P	469	478	anti-parallel
Strand 5	P	410	417	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	448	450	first strand
Strand 2	P	545	548	anti-parallel
Strand 3	P	501	504	anti-parallel
Strand 4	P	482	485	parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	529	530	first strand
Strand 2	P	506	509	anti-parallel
Strand 3	P	541	543	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	516	518	first strand
Strand 2	P	521	523	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	93	94	first strand
Strand 2	R	115	125	anti-parallel
Strand 3	R	132	140	anti-parallel
Strand 4	R	146	152	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	93	94	first strand
Strand 2	R	115	125	anti-parallel
Strand 3	R	103	110	anti-parallel
Strand 4	R	189	190	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	96	97	first strand
Strand 2	R	100	101	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6X0L

Analysis of interatomic Contacts of Structural Units in PDB entry:
6X0L