Analysis of interatomic Contacts of Structural Units in PDB entry:
6X0P

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6X0P entry

There are 4 chains in PDB entry 6X0P (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY 2063	GLY 2281
B	GLY 2063	LYS 2282
C	GLY 2063	LYS 2282
D	GLY 2063	LYS 2282

There are 21 helices in PDB entry 6X0P. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	2110	2114	Right-handed 310
Helix 2	AA2	A	2124	2128	Right-handed 310
Helix 3	AA3	A	2176	2186	Right-handed alpha
Helix 4	AA4	A	2211	2216	Right-handed 310
Helix 5	AA5	A	2254	2259	Right-handed alpha
Helix 6	AA6	B	2110	2114	Right-handed 310
Helix 7	AA7	B	2124	2128	Right-handed 310
Helix 8	AA8	B	2176	2186	Right-handed alpha
Helix 9	AA9	B	2187	2190	Right-handed 310
Helix 10	AB1	B	2211	2216	Right-handed 310
Helix 11	AB2	B	2254	2259	Right-handed alpha
Helix 12	AB3	C	2110	2114	Right-handed 310
Helix 13	AB4	C	2124	2128	Right-handed 310
Helix 14	AB5	C	2176	2186	Right-handed alpha
Helix 15	AB6	C	2211	2216	Right-handed 310
Helix 16	AB7	C	2254	2259	Right-handed alpha
Helix 17	AB8	D	2110	2114	Right-handed 310
Helix 18	AB9	D	2124	2128	Right-handed 310
Helix 19	AC1	D	2176	2186	Right-handed alpha
Helix 20	AC2	D	2211	2216	Right-handed 310
Helix 21	AC3	D	2254	2259	Right-handed alpha

There are 20 sheets in PDB entry 6X0P. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2070	2071	first strand
Strand 2	A	2209	2210	parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2076	2077	first strand
Strand 2	A	2172	2175	parallel
Strand 3	A	2202	2205	anti-parallel
Strand 4	A	2195	2199	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2142	2146	first strand
Strand 2	A	2152	2156	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2165	2168	first strand
Strand 2	A	2234	2241	anti-parallel
Strand 3	A	2224	2231	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2217	2218	first strand
Strand 2	A	2252	2253	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2070	2071	first strand
Strand 2	B	2209	2210	parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2076	2077	first strand
Strand 2	B	2172	2175	parallel
Strand 3	B	2202	2205	anti-parallel
Strand 4	B	2195	2199	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2142	2146	first strand
Strand 2	B	2152	2156	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2165	2168	first strand
Strand 2	B	2234	2241	anti-parallel
Strand 3	B	2224	2231	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2217	2218	first strand
Strand 2	B	2252	2253	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	2070	2071	first strand
Strand 2	C	2209	2210	parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	2076	2077	first strand
Strand 2	C	2172	2175	parallel
Strand 3	C	2202	2205	anti-parallel
Strand 4	C	2195	2199	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	2142	2146	first strand
Strand 2	C	2152	2156	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	2165	2168	first strand
Strand 2	C	2234	2241	anti-parallel
Strand 3	C	2224	2231	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	2217	2218	first strand
Strand 2	C	2252	2253	parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	2070	2071	first strand
Strand 2	D	2209	2210	parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	2076	2077	first strand
Strand 2	D	2172	2175	parallel
Strand 3	D	2202	2205	anti-parallel
Strand 4	D	2195	2199	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	2142	2146	first strand
Strand 2	D	2152	2156	anti-parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	2165	2168	first strand
Strand 2	D	2234	2241	anti-parallel
Strand 3	D	2224	2231	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	2217	2218	first strand
Strand 2	D	2252	2253	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6X0P

Analysis of interatomic Contacts of Structural Units in PDB entry:
6X0P