Analysis of interatomic Contacts of Structural Units in PDB entry:
6X1G


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6X1G entry

There are 4 chains in PDB entry 6X1G (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
MET 547HIS 762
C
MET 547HIS 762
B
MET 1HIS 178
D
MET 1HIS 178
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 41 helices in PDB entry 6X1G. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
547 580Right-handed alpha
Helix 2
AA2
A
588 601Right-handed alpha
Helix 3
AA3
A
608 626Right-handed alpha
Helix 4
AA4
A
629 651Right-handed alpha
Helix 5
AA5
A
653 673Right-handed alpha
Helix 6
AA6
A
679 688Right-handed alpha
Helix 7
AA7
A
689 691Right-handed 310
Helix 8
AA8
A
696 701Right-handed 310
Helix 9
AA9
A
709 723Right-handed alpha
Helix 10
AB1
A
732 739Right-handed 310
Helix 11
AB2
A
740 760Right-handed alpha
Helix 12
AB3
C
548 580Right-handed alpha
Helix 13
AB4
C
588 601Right-handed alpha
Helix 14
AB5
C
608 626Right-handed alpha
Helix 15
AB6
C
629 651Right-handed alpha
Helix 16
AB7
C
653 673Right-handed alpha
Helix 17
AB8
C
679 688Right-handed alpha
Helix 18
AB9
C
689 691Right-handed 310
Helix 19
AC1
C
696 701Right-handed 310
Helix 20
AC2
C
709 723Right-handed alpha
Helix 21
AC3
C
732 739Right-handed 310
Helix 22
AC4
C
740 760Right-handed alpha
Helix 23
AC5
B
12 14Right-handed 310
Helix 24
AC6
B
15 26Right-handed alpha
Helix 25
AC7
B
61 65Right-handed 310
Helix 26
AC8
B
67 72Right-handed 310
Helix 27
AC9
B
86 96Right-handed alpha
Helix 28
AD1
B
96 105Right-handed alpha
Helix 29
AD2
B
116 120Right-handed 310
Helix 30
AD3
B
122 131Right-handed alpha
Helix 31
AD4
B
138 150Right-handed alpha
Helix 32
AD5
B
164 178Right-handed alpha
Helix 33
AD6
D
15 26Right-handed alpha
Helix 34
AD7
D
61 65Right-handed 310
Helix 35
AD8
D
67 72Right-handed 310
Helix 36
AD9
D
86 96Right-handed alpha
Helix 37
AE1
D
96 105Right-handed alpha
Helix 38
AE2
D
116 120Right-handed 310
Helix 39
AE3
D
122 131Right-handed alpha
Helix 40
AE4
D
138 150Right-handed alpha
Helix 41
AE5
D
164 178Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 6X1G. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
42 46first strand
Strand 2
B
49 57anti-parallel
Strand 3
B
3 10parallel
Strand 4
B
77 83parallel
Strand 5
B
110 115parallel
Strand 6
B
153 156parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
42 46first strand
Strand 2
D
49 57anti-parallel
Strand 3
D
3 10parallel
Strand 4
D
77 83parallel
Strand 5
D
110 115parallel
Strand 6
D
153 156parallel
Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il