Analysis of interatomic Contacts of Structural Units in PDB entry:
6X24


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6X24 entry

There are 4 chains in PDB entry 6X24 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 5ILE 485
B
 LYS 5ILE 485
C
 LYS 5SER 486
D
 LYS 5SER 486
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are104 helices in PDB entry 6X24. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
20 28Right-handed alpha
Helix 2
AA2
A
49 71Right-handed alpha
Helix 3
AA3
A
81 92Right-handed alpha
Helix 4
AA4
A
105 121Right-handed alpha
Helix 5
AA5
A
136 140Right-handed 310
Helix 6
AA6
A
151 159Right-handed alpha
Helix 7
AA7
A
196 198Right-handed 310
Helix 8
AA8
A
199 204Right-handed alpha
Helix 9
AA9
A
205 208Right-handed 310
Helix 10
AB1
A
213 228Right-handed alpha
Helix 11
AB2
A
231 236Right-handed alpha
Helix 12
AB3
A
247 253Right-handed alpha
Helix 13
AB4
A
257 275Right-handed alpha
Helix 14
AB5
A
277 304Right-handed alpha
Helix 15
AB6
A
324 334Right-handed alpha
Helix 16
AB7
A
338 351Right-handed alpha
Helix 17
AB8
A
355 369Right-handed alpha
Helix 18
AB9
A
373 385Right-handed alpha
Helix 19
AC1
A
389 402Right-handed alpha
Helix 20
AC2
A
415 424Right-handed alpha
Helix 21
AC3
A
425 428Right-handed 310
Helix 22
AC4
A
429 434Right-handed alpha
Helix 23
AC5
A
435 438Right-handed 310
Helix 24
AC6
A
452 459Right-handed alpha
Helix 25
AC7
A
473 483Right-handed alpha
Helix 26
AC8
B
20 26Right-handed alpha
Helix 27
AC9
B
39 44Right-handed alpha
Helix 28
AD1
B
45 47Right-handed 310
Helix 29
AD2
B
49 71Right-handed alpha
Helix 30
AD3
B
81 94Right-handed alpha
Helix 31
AD4
B
105 121Right-handed alpha
Helix 32
AD5
B
150 159Right-handed alpha
Helix 33
AD6
B
196 198Right-handed 310
Helix 34
AD7
B
199 204Right-handed alpha
Helix 35
AD8
B
205 209Right-handed 310
Helix 36
AD9
B
213 225Right-handed alpha
Helix 37
AE1
B
228 230Right-handed 310
Helix 38
AE2
B
231 236Right-handed alpha
Helix 39
AE3
B
247 253Right-handed alpha
Helix 40
AE4
B
257 275Right-handed alpha
Helix 41
AE5
B
278 304Right-handed alpha
Helix 42
AE6
B
324 334Right-handed alpha
Helix 43
AE7
B
338 352Right-handed alpha
Helix 44
AE8
B
355 368Right-handed alpha
Helix 45
AE9
B
373 385Right-handed alpha
Helix 46
AF1
B
390 402Right-handed alpha
Helix 47
AF2
B
415 424Right-handed alpha
Helix 48
AF3
B
425 428Right-handed 310
Helix 49
AF4
B
429 434Right-handed alpha
Helix 50
AF5
B
435 438Right-handed 310
Helix 51
AF6
B
447 451Right-handed 310
Helix 52
AF7
B
452 457Right-handed alpha
Helix 53
AF8
B
473 483Right-handed alpha
Helix 54
AF9
C
20 26Right-handed alpha
Helix 55
AG1
C
49 69Right-handed alpha
Helix 56
AG2
C
81 94Right-handed alpha
Helix 57
AG3
C
105 122Right-handed alpha
Helix 58
AG4
C
150 159Right-handed alpha
Helix 59
AG5
C
196 200Right-handed 310
Helix 60
AG6
C
202 209Right-handed 310
Helix 61
AG7
C
213 228Right-handed alpha
Helix 62
AG8
C
231 236Right-handed alpha
Helix 63
AG9
C
247 253Right-handed alpha
Helix 64
AH1
C
257 275Right-handed alpha
Helix 65
AH2
C
279 304Right-handed alpha
Helix 66
AH3
C
324 333Right-handed alpha
Helix 67
AH4
C
338 352Right-handed alpha
Helix 68
AH5
C
355 363Right-handed alpha
Helix 69
AH6
C
363 368Right-handed alpha
Helix 70
AH7
C
373 385Right-handed alpha
Helix 71
AH8
C
389 401Right-handed alpha
Helix 72
AH9
C
415 424Right-handed alpha
Helix 73
AI1
C
427 434Right-handed alpha
Helix 74
AI2
C
435 438Right-handed 310
Helix 75
AI3
C
441 445Right-handed 310
Helix 76
AI4
C
447 451Right-handed 310
Helix 77
AI5
C
452 457Right-handed alpha
Helix 78
AI6
C
473 483Right-handed alpha
Helix 79
AI7
D
20 30Right-handed alpha
Helix 80
AI8
D
39 47Right-handed 310
Helix 81
AI9
D
49 69Right-handed alpha
Helix 82
AJ1
D
81 94Right-handed alpha
Helix 83
AJ2
D
105 121Right-handed alpha
Helix 84
AJ3
D
150 159Right-handed alpha
Helix 85
AJ4
D
196 198Right-handed 310
Helix 86
AJ5
D
199 204Right-handed alpha
Helix 87
AJ6
D
205 207Right-handed 310
Helix 88
AJ7
D
213 227Right-handed alpha
Helix 89
AJ8
D
231 236Right-handed alpha
Helix 90
AJ9
D
247 253Right-handed alpha
Helix 91
AK1
D
257 275Right-handed alpha
Helix 92
AK2
D
278 304Right-handed alpha
Helix 93
AK3
D
324 334Right-handed alpha
Helix 94
AK4
D
338 349Right-handed alpha
Helix 95
AK5
D
355 368Right-handed alpha
Helix 96
AK6
D
373 385Right-handed alpha
Helix 97
AK7
D
389 401Right-handed alpha
Helix 98
AK8
D
415 424Right-handed alpha
Helix 99
AK9
D
425 428Right-handed 310
Helix 100
AL1
D
429 434Right-handed alpha
Helix 101
AL2
D
435 438Right-handed 310
Helix 102
AL3
D
447 451Right-handed 310
Helix 103
AL4
D
452 459Right-handed alpha
Helix 104
AL5
D
473 485Right-handed alpha
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There are 4 sheets in PDB entry 6X24. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
75 77first strand
Strand 2
A
32 37parallel
Strand 3
A
7 10parallel
Strand 4
A
97 100parallel
Strand 5
A
125 128parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
75 78first strand
Strand 2
B
31 38parallel
Strand 3
B
6 10parallel
Strand 4
B
97 101parallel
Strand 5
B
125 129parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
75 77first strand
Strand 2
C
33 37parallel
Strand 3
C
7 10parallel
Strand 4
C
97 101parallel
Strand 5
C
125 129parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
75 77first strand
Strand 2
D
31 37parallel
Strand 3
D
6 10parallel
Strand 4
D
97 101parallel
Strand 5
D
125 129parallel
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