Analysis of interatomic Contacts of Structural Units in PDB entry:
6X3A


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6X3A entry

There is 1 chain in PDB entry 6X3A (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
SER 610GLU 915
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 3 helices in PDB entry 6X3A. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
634 638Right-handed 310
Helix 2
AA2
A
736 740Right-handed 310
Helix 3
AA3
A
771 775Right-handed 310
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There are 8 sheets in PDB entry 6X3A. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
614 622first strand
Strand 2
A
625 631anti-parallel
Strand 3
A
671 674anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
660 666first strand
Strand 2
A
644 652anti-parallel
Strand 3
A
682 690anti-parallel
Strand 4
A
695 698anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
660 666first strand
Strand 2
A
644 652anti-parallel
Strand 3
A
682 690anti-parallel
Strand 4
A
702 705anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
716 724first strand
Strand 2
A
727 733anti-parallel
Strand 3
A
783 787anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
758 759first strand
Strand 2
A
746 755anti-parallel
Strand 3
A
795 804anti-parallel
Strand 4
A
807 811anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
764 769first strand
Strand 2
A
746 755anti-parallel
Strand 3
A
795 804anti-parallel
Strand 4
A
815 818anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
828 834first strand
Strand 2
A
838 844anti-parallel
Strand 3
A
879 883anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
869 874first strand
Strand 2
A
855 862anti-parallel
Strand 3
A
890 898anti-parallel
Strand 4
A
907 912anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il