Analysis of interatomic Contacts of Structural Units in PDB entry:
6X44


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6X44 entry

There are 2 chains in PDB entry 6X44 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 393ASN 828
B
 THR 391ASN 828
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 6X44. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
393 416Right-handed alpha
Helix 2
AA2
A
429 433Right-handed 310
Helix 3
AA3
A
434 452Right-handed alpha
Helix 4
AA4
A
455 460Right-handed alpha
Helix 5
AA5
A
464 478Right-handed alpha
Helix 6
AA6
A
483 491Right-handed alpha
Helix 7
AA7
A
492 498Right-handed 310
Helix 8
AA8
A
500 506Right-handed 310
Helix 9
AA9
A
562 567Right-handed alpha
Helix 10
AB1
A
573 577Right-handed 310
Helix 11
AB2
A
581 585Right-handed 310
Helix 12
AB3
A
595 612Right-handed alpha
Helix 13
AB4
A
620 627Right-handed alpha
Helix 14
AB5
A
641 653Right-handed alpha
Helix 15
AB6
A
657 661Right-handed 310
Helix 16
AB7
A
664 668Right-handed 310
Helix 17
AB8
A
709 712Right-handed 310
Helix 18
AB9
A
714 730Right-handed alpha
Helix 19
AC1
B
393 415Right-handed alpha
Helix 20
AC2
B
429 433Right-handed 310
Helix 21
AC3
B
434 452Right-handed alpha
Helix 22
AC4
B
455 460Right-handed alpha
Helix 23
AC5
B
464 479Right-handed alpha
Helix 24
AC6
B
483 491Right-handed alpha
Helix 25
AC7
B
492 498Right-handed 310
Helix 26
AC8
B
500 506Right-handed 310
Helix 27
AC9
B
517 522Right-handed alpha
Helix 28
AD1
B
573 577Right-handed 310
Helix 29
AD2
B
581 585Right-handed 310
Helix 30
AD3
B
595 612Right-handed alpha
Helix 31
AD4
B
620 627Right-handed alpha
Helix 32
AD5
B
641 653Right-handed alpha
Helix 33
AD6
B
657 661Right-handed 310
Helix 34
AD7
B
664 668Right-handed 310
Helix 35
AD8
B
709 712Right-handed 310
Helix 36
AD9
B
714 730Right-handed alpha
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There are 4 sheets in PDB entry 6X44. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
687 688first strand
Strand 2
A
822 823anti-parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
698 700first strand
Strand 2
A
703 707anti-parallel
Strand 3
A
816 820anti-parallel
Strand 4
A
732 736anti-parallel
Strand 5
A
762 773anti-parallel
Strand 6
A
779 786anti-parallel
Strand 7
A
798 802anti-parallel
Strand 8
A
751 752parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
687 688first strand
Strand 2
B
822 823anti-parallel
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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
698 700first strand
Strand 2
B
703 707anti-parallel
Strand 3
B
816 820anti-parallel
Strand 4
B
732 736anti-parallel
Strand 5
B
762 773anti-parallel
Strand 6
B
779 786anti-parallel
Strand 7
B
798 802anti-parallel
Strand 8
B
751 752parallel
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