Analysis of interatomic Contacts of Structural Units in PDB entry:
6X5A


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6X5A entry

There are 11 chains in PDB entry 6X5A (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
LYS 37ARG 134
B
ARG 23GLY 102
C
ALA 10PRO 117
D
LYS 30SER 124
E
LYS 37ARG 134
F
LEU 22GLY 102
G
ALA 10LEU 116
H
ARG 31SER 124
I
T 1 G 145
J
C 1 A 145
K
GLU 146LEU 507
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 48 helices in PDB entry 6X5A. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
44 55Right-handed alpha
Helix 2
AA2
A
63 76Right-handed alpha
Helix 3
AA3
A
85 114Right-handed alpha
Helix 4
AA4
A
120 132Right-handed alpha
Helix 5
AA5
B
30 41Right-handed alpha
Helix 6
AA6
B
49 76Right-handed alpha
Helix 7
AA7
B
82 92Right-handed alpha
Helix 8
AA8
C
16 22Right-handed alpha
Helix 9
AA9
C
26 36Right-handed alpha
Helix 10
AB1
C
46 72Right-handed alpha
Helix 11
AB2
C
79 90Right-handed alpha
Helix 12
AB3
C
92 97Right-handed alpha
Helix 13
AB4
C
112 116Right-handed 310
Helix 14
AB5
D
37 49Right-handed alpha
Helix 15
AB6
D
55 84Right-handed alpha
Helix 16
AB7
D
90 102Right-handed alpha
Helix 17
AB8
D
103 123Right-handed alpha
Helix 18
AB9
E
44 55Right-handed alpha
Helix 19
AC1
E
63 76Right-handed alpha
Helix 20
AC2
E
85 114Right-handed alpha
Helix 21
AC3
E
120 132Right-handed alpha
Helix 22
AC4
F
25 29Right-handed 310
Helix 23
AC5
F
30 42Right-handed alpha
Helix 24
AC6
F
49 76Right-handed alpha
Helix 25
AC7
F
82 92Right-handed alpha
Helix 26
AC8
G
16 22Right-handed alpha
Helix 27
AC9
G
26 36Right-handed alpha
Helix 28
AD1
G
46 73Right-handed alpha
Helix 29
AD2
G
79 89Right-handed alpha
Helix 30
AD3
G
92 97Right-handed alpha
Helix 31
AD4
G
112 116Right-handed 310
Helix 32
AD5
H
37 49Right-handed alpha
Helix 33
AD6
H
57 84Right-handed alpha
Helix 34
AD7
H
90 102Right-handed alpha
Helix 35
AD8
H
104 123Right-handed alpha
Helix 36
AD9
K
147 183Right-handed alpha
Helix 37
AE1
K
248 250Right-handed 310
Helix 38
AE2
K
258 276Right-handed alpha
Helix 39
AE3
K
319 323Right-handed 310
Helix 40
AE4
K
333 342Right-handed alpha
Helix 41
AE5
K
367 377Right-handed alpha
Helix 42
AE6
K
393 412Right-handed alpha
Helix 43
AE7
K
419 434Right-handed alpha
Helix 44
AE8
K
436 440Right-handed 310
Helix 45
AE9
K
441 443Right-handed 310
Helix 46
AF1
K
444 462Right-handed alpha
Helix 47
AF2
K
482 499Right-handed alpha
Helix 48
AF3
K
500 506Right-handed 310
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There are 13 sheets in PDB entry 6X5A. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
83 84first strand
Strand 2
B
80 81parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
118 119first strand
Strand 2
B
45 46parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
97 98first strand
Strand 2
G
101 102parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
42 43first strand
Strand 2
D
88 89parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
77 78first strand
Strand 2
D
53 54parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
100 102first strand
Strand 2
F
96 98parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
83 84first strand
Strand 2
F
80 81parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
118 119first strand
Strand 2
F
45 46parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
42 43first strand
Strand 2
H
88 89parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
77 78first strand
Strand 2
H
53 54parallel
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There are 7 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
K
192 195first strand
Strand 2
K
211 219anti-parallel
Strand 3
K
303 314parallel
Strand 4
K
345 349anti-parallel
Strand 5
K
363 366anti-parallel
Strand 6
K
234 239anti-parallel
Strand 7
K
223 227anti-parallel
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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
K
192 195first strand
Strand 2
K
211 219anti-parallel
Strand 3
K
303 314parallel
Strand 4
K
294 299anti-parallel
Strand 5
K
282 285anti-parallel
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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
K
252 253first strand
Strand 2
K
256 257anti-parallel
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