Analysis of interatomic Contacts of Structural Units in PDB entry:
6X5C


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6X5C entry

There are 9 chains in PDB entry 6X5C (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
LYS 33ARG 504
B
ALA 512LEU 660
C
LYS 1LEU 96
D
LYS 33ARG 504
F
ALA 517LEU 660
I
LYS 1LEU 96
E
LYS 33ARG 504
G
ALA 512GLU 659
J
LYS 1LEU 96
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 49 helices in PDB entry 6X5C. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
65 68Right-handed 310
Helix 2
AA2
A
69 74Right-handed alpha
Helix 3
AA3
A
99 114Right-handed alpha
Helix 4
AA4
A
334 353Right-handed alpha
Helix 5
AA5
A
368 373Right-handed alpha
Helix 6
AA6
A
474 484Right-handed alpha
Helix 7
AA7
B
517 522Right-handed alpha
Helix 8
AA8
B
529 546Right-handed alpha
Helix 9
AA9
B
561 565Right-handed 310
Helix 10
AB1
B
566 593Right-handed alpha
Helix 11
AB2
B
594 597Right-handed 310
Helix 12
AB3
B
618 625Right-handed alpha
Helix 13
AB4
B
627 635Right-handed alpha
Helix 14
AB5
B
638 659Right-handed alpha
Helix 15
AB6
C
58 64Right-handed 310
Helix 16
AB7
C
75 79Right-handed 310
Helix 17
AB8
D
65 68Right-handed 310
Helix 18
AB9
D
69 74Right-handed alpha
Helix 19
AC1
D
99 114Right-handed alpha
Helix 20
AC2
D
334 353Right-handed alpha
Helix 21
AC3
D
368 373Right-handed alpha
Helix 22
AC4
D
475 483Right-handed alpha
Helix 23
AC5
F
519 524Right-handed alpha
Helix 24
AC6
F
529 546Right-handed alpha
Helix 25
AC7
F
561 565Right-handed 310
Helix 26
AC8
F
566 593Right-handed alpha
Helix 27
AC9
F
594 597Right-handed 310
Helix 28
AD1
F
611 615Right-handed 310
Helix 29
AD2
F
618 626Right-handed alpha
Helix 30
AD3
F
627 635Right-handed alpha
Helix 31
AD4
F
638 659Right-handed alpha
Helix 32
AD5
I
58 64Right-handed 310
Helix 33
AD6
I
75 79Right-handed 310
Helix 34
AD7
E
64 72Right-handed alpha
Helix 35
AD8
E
99 114Right-handed alpha
Helix 36
AD9
E
334 350Right-handed alpha
Helix 37
AE1
E
368 373Right-handed alpha
Helix 38
AE2
E
387 391Right-handed 310
Helix 39
AE3
E
479 484Right-handed alpha
Helix 40
AE4
G
520 526Right-handed alpha
Helix 41
AE5
G
529 546Right-handed alpha
Helix 42
AE6
G
561 565Right-handed 310
Helix 43
AE7
G
567 593Right-handed alpha
Helix 44
AE8
G
594 597Right-handed 310
Helix 45
AE9
G
618 625Right-handed alpha
Helix 46
AF1
G
627 635Right-handed alpha
Helix 47
AF2
G
638 658Right-handed alpha
Helix 48
AF3
J
58 64Right-handed 310
Helix 49
AF4
J
75 79Right-handed 310
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There are 28 sheets in PDB entry 6X5C. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
494 500first strand
Strand 2
A
34 40anti-parallel
Strand 3
B
603 609anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
45 47first strand
Strand 2
A
486 491anti-parallel
Strand 3
A
224 228anti-parallel
Strand 4
A
242 245anti-parallel
Strand 5
A
84 85anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
53 55first strand
Strand 2
A
216 218anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
91 94first strand
Strand 2
A
236 239anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
199 202first strand
Strand 2
A
120 123anti-parallel
Strand 3
A
432 434anti-parallel
Strand 4
A
423 425anti-parallel
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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
259 261first strand
Strand 2
A
443 455anti-parallel
Strand 3
A
284 298anti-parallel
Strand 4
A
328 333anti-parallel
Strand 5
A
414 421anti-parallel
Strand 6
A
381 385anti-parallel
Strand 7
A
374 378anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
271 273first strand
Strand 2
A
284 298anti-parallel
Strand 3
A
443 455anti-parallel
Strand 4
A
469 470anti-parallel
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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
2 5first strand
Strand 2
C
92 96parallel
Strand 3
C
81 86anti-parallel
Strand 4
C
26 30anti-parallel
Strand 5
C
35 40anti-parallel
Strand 6
C
43 46anti-parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
12 17first strand
Strand 2
C
66 71anti-parallel
Strand 3
C
55 56anti-parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
494 499first strand
Strand 2
D
35 40anti-parallel
Strand 3
F
603 609anti-parallel
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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
45 47first strand
Strand 2
D
486 491anti-parallel
Strand 3
D
223 228anti-parallel
Strand 4
D
242 245anti-parallel
Strand 5
D
84 85anti-parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
53 56first strand
Strand 2
D
215 218anti-parallel
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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
91 92first strand
Strand 2
D
238 239anti-parallel
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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
199 202first strand
Strand 2
D
120 123anti-parallel
Strand 3
D
432 434anti-parallel
Strand 4
D
423 425anti-parallel
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There are 7 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
259 261first strand
Strand 2
D
447 455anti-parallel
Strand 3
D
284 298anti-parallel
Strand 4
D
328 333anti-parallel
Strand 5
D
414 420anti-parallel
Strand 6
D
381 386anti-parallel
Strand 7
D
374 378anti-parallel
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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
271 273first strand
Strand 2
D
284 298anti-parallel
Strand 3
D
447 455anti-parallel
Strand 4
D
469 470anti-parallel
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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
259 261first strand
Strand 2
D
447 455anti-parallel
Strand 3
D
284 298anti-parallel
Strand 4
D
443 444anti-parallel
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There are 6 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
2 5first strand
Strand 2
I
92 96parallel
Strand 3
I
81 86anti-parallel
Strand 4
I
26 30anti-parallel
Strand 5
I
35 40anti-parallel
Strand 6
I
43 46anti-parallel
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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
14 17first strand
Strand 2
I
66 71anti-parallel
Strand 3
I
55 56anti-parallel
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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
494 499first strand
Strand 2
E
35 40anti-parallel
Strand 3
G
603 609anti-parallel
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There are 5 strands in AC3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
45 47first strand
Strand 2
E
486 491anti-parallel
Strand 3
E
225 228anti-parallel
Strand 4
E
242 245anti-parallel
Strand 5
E
84 85anti-parallel
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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
53 56first strand
Strand 2
E
215 218anti-parallel
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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
91 94first strand
Strand 2
E
236 239anti-parallel
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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
199 202first strand
Strand 2
E
120 123anti-parallel
Strand 3
E
432 434anti-parallel
Strand 4
E
423 425anti-parallel
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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
260 261first strand
Strand 2
E
443 454anti-parallel
Strand 3
E
284 298anti-parallel
Strand 4
E
271 273anti-parallel
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There are 7 strands in AC8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
260 261first strand
Strand 2
E
443 454anti-parallel
Strand 3
E
284 298anti-parallel
Strand 4
E
328 333anti-parallel
Strand 5
E
414 420anti-parallel
Strand 6
E
381 386anti-parallel
Strand 7
E
374 378anti-parallel
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There are 6 strands in AC9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
2 5first strand
Strand 2
J
92 96parallel
Strand 3
J
81 86anti-parallel
Strand 4
J
26 30anti-parallel
Strand 5
J
35 40anti-parallel
Strand 6
J
43 46anti-parallel
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There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
12 17first strand
Strand 2
J
66 71anti-parallel
Strand 3
J
55 56anti-parallel
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