Analysis of interatomic Contacts of Structural Units in PDB entry:
6X5H

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6X5H entry

There are 3 chains in PDB entry 6X5H (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LEU 108	GLU 574
B	LEU 108	GLU 574
C	LEU 108	LYS 402

There are 66 helices in PDB entry 6X5H. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	109	138	Right-handed alpha
Helix 2	AA2	A	141	173	Right-handed alpha
Helix 3	AA3	A	175	200	Right-handed alpha
Helix 4	AA4	A	203	207	Right-handed 310
Helix 5	AA5	A	219	238	Right-handed alpha
Helix 6	AA6	A	254	258	Right-handed 310
Helix 7	AA7	A	293	297	Right-handed 310
Helix 8	AA8	A	310	320	Right-handed alpha
Helix 9	AA9	A	322	336	Right-handed alpha
Helix 10	AB1	A	339	354	Right-handed alpha
Helix 11	AB2	A	366	370	Right-handed 310
Helix 12	AB3	A	378	397	Right-handed alpha
Helix 13	AB4	A	412	421	Right-handed alpha
Helix 14	AB5	A	429	436	Right-handed alpha
Helix 15	AB6	A	437	441	Right-handed 310
Helix 16	AB7	A	443	460	Right-handed alpha
Helix 17	AB8	A	469	481	Right-handed alpha
Helix 18	AB9	A	570	574	Right-handed 310
Helix 19	AC1	B	109	138	Right-handed alpha
Helix 20	AC2	B	141	173	Right-handed alpha
Helix 21	AC3	B	175	200	Right-handed alpha
Helix 22	AC4	B	203	207	Right-handed 310
Helix 23	AC5	B	219	238	Right-handed alpha
Helix 24	AC6	B	254	258	Right-handed 310
Helix 25	AC7	B	293	297	Right-handed 310
Helix 26	AC8	B	310	320	Right-handed alpha
Helix 27	AC9	B	322	336	Right-handed alpha
Helix 28	AD1	B	339	354	Right-handed alpha
Helix 29	AD2	B	366	370	Right-handed 310
Helix 30	AD3	B	378	397	Right-handed alpha
Helix 31	AD4	B	412	421	Right-handed alpha
Helix 32	AD5	B	429	436	Right-handed alpha
Helix 33	AD6	B	437	441	Right-handed 310
Helix 34	AD7	B	443	459	Right-handed alpha
Helix 35	AD8	B	469	481	Right-handed alpha
Helix 36	AD9	B	570	574	Right-handed 310
Helix 37	AE1	C	109	138	Right-handed alpha
Helix 38	AE2	C	141	173	Right-handed alpha
Helix 39	AE3	C	175	200	Right-handed alpha
Helix 40	AE4	C	203	207	Right-handed 310
Helix 41	AE5	C	219	238	Right-handed alpha
Helix 42	AE6	C	254	258	Right-handed 310
Helix 43	AE7	C	293	297	Right-handed 310
Helix 44	AE8	C	310	320	Right-handed alpha
Helix 45	AE9	C	322	336	Right-handed alpha
Helix 46	AF1	C	339	354	Right-handed alpha
Helix 47	AF2	C	378	395	Right-handed alpha
Helix 48	AF3	C	412	421	Right-handed alpha
Helix 49	AF4	C	445	460	Right-handed alpha
Helix 50	AF5	C	469	481	Right-handed alpha
Helix 51	AF6	C	570	574	Right-handed 310
Helix 52	AF7	D	109	138	Right-handed alpha
Helix 53	AF8	D	141	173	Right-handed alpha
Helix 54	AF9	D	175	200	Right-handed alpha
Helix 55	AG1	D	203	207	Right-handed 310
Helix 56	AG2	D	219	238	Right-handed alpha
Helix 57	AG3	D	254	258	Right-handed 310
Helix 58	AG4	D	293	297	Right-handed 310
Helix 59	AG5	D	310	320	Right-handed alpha
Helix 60	AG6	D	322	336	Right-handed alpha
Helix 61	AG7	D	339	354	Right-handed alpha
Helix 62	AG8	D	378	395	Right-handed alpha
Helix 63	AG9	D	412	421	Right-handed alpha
Helix 64	AH1	D	446	459	Right-handed alpha
Helix 65	AH2	D	469	480	Right-handed alpha
Helix 66	AH3	D	570	574	Right-handed 310

There are 16 sheets in PDB entry 6X5H. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	240	244	first strand
Strand 2	A	209	213	parallel
Strand 3	A	288	290	parallel
Strand 4	A	274	276	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	308	309	first strand
Strand 2	A	564	565	parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	424	427	first strand
Strand 2	A	402	408	parallel
Strand 3	A	359	364	parallel
Strand 4	A	462	465	parallel
Strand 5	A	490	492	parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	549	554	first strand
Strand 2	A	539	544	anti-parallel
Strand 3	A	528	534	anti-parallel
Strand 4	A	506	509	anti-parallel
Strand 5	A	558	560	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	240	244	first strand
Strand 2	B	209	213	parallel
Strand 3	B	288	290	parallel
Strand 4	B	274	276	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	308	309	first strand
Strand 2	B	564	565	parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	424	427	first strand
Strand 2	B	402	408	parallel
Strand 3	B	359	364	parallel
Strand 4	B	462	465	parallel
Strand 5	B	490	492	parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	549	554	first strand
Strand 2	B	539	544	anti-parallel
Strand 3	B	528	534	anti-parallel
Strand 4	B	506	509	anti-parallel
Strand 5	B	558	560	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	240	244	first strand
Strand 2	C	209	213	parallel
Strand 3	C	288	290	parallel
Strand 4	C	274	276	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	308	309	first strand
Strand 2	C	564	565	parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	424	427	first strand
Strand 2	C	402	408	parallel
Strand 3	C	359	364	parallel
Strand 4	C	462	465	parallel
Strand 5	C	490	492	parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	550	554	first strand
Strand 2	C	539	544	anti-parallel
Strand 3	C	528	534	anti-parallel
Strand 4	C	506	509	anti-parallel
Strand 5	C	558	560	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	240	244	first strand
Strand 2	D	209	213	parallel
Strand 3	D	288	290	parallel
Strand 4	D	274	276	parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	308	309	first strand
Strand 2	D	564	565	parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	424	427	first strand
Strand 2	D	402	408	parallel
Strand 3	D	359	364	parallel
Strand 4	D	462	465	parallel
Strand 5	D	490	492	parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	549	554	first strand
Strand 2	D	539	544	anti-parallel
Strand 3	D	528	534	anti-parallel
Strand 4	D	506	509	anti-parallel
Strand 5	D	558	560	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6X5H

Analysis of interatomic Contacts of Structural Units in PDB entry:
6X5H